|   |
680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | V | V | V | V | G | A | G | N | T | A | M | D | C | A | R | A | A | L | R | V | P | G | V | E | K | A | T | I | V | Y | R | R | S | L | Q | E | M | P | A | W | R | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | E | E | A | L | H | D | G | V | E | F | R | F | L | N | N | P | E | R |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | V | I | V | L | G | S | S | H | G | G | Y | E | A | V | E | E | L | L | N | L | H | P | D | A | E | I | Q | W | Y | E | K | G | D | F | I | S | F | L | S | A | G | M | Q | L | Y | L | E | G | K | V | K | D | V | N | S | V | R | Y | M | T | G | E | K | M | E | S | R | G | V | N | V | F | S | N | T | E | I | T | A |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  | S | S | S | S | S | S | B |
| G | G | G |  |  |  |  |  | T | T | S | S |
|
| G | G | G | S | B | S |
|
|  |  |  |  |  |  | T | T |
|  |  |  |  | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
743 | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | D | A | D | G | T | L | T | L | R | V | M | S | L | G | E | P | D | E | K | G | R | R | R | P | V | E | T | N | E | T | V | T | L | L | V | D | S | L | I | T | A | I | G | E | Q | Q | D | T | E | . |
. |
. |
. |
. |
. |
. |
A | L | N | A | M | G | V | P | L | D | K | N | G | W | P | D | V | D | H | N | G | E | T |
Query Conservation |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |
| . | . | . | . | . | . | . |
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
Template Sequence |   |
I | Q | P | K | E | H | Q | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | V | K | D | L | V | S | G | E | E | R | V | E | N | Y | D | K | L | I | I | S | P | G | A | V | P | F | E | L | D | G | V | R | P | N | T | A | W | L | K | G | T | L | E | L | H | P | N | G | L | I | K | T | D | E | Y | M | R | T |
Template Known Secondary structure |   |
 |  | T | T | T | T |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | T | T | T |
|
|  |  |  |  |  |
| S |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  | S |
| G | G | G | T | T | T | S |
| B |
| T | T | S |
| B |
|
|
| T | T |
| B |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
816 | . | . | . | 820 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | T | D | V | F | M | I | G | D | V | Q | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | P | S | S | I | V | A | A | V | G | T | A | R | R | A | T | D | A | I | L | S |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |
Template Sequence |   |
S | E | P | D | V | F | A | V | G | D | A | T | L | I | K | Y | N | P | A | D | T | E | V | N | I | A | L | A | T | N | A | R | K | Q | G | R | F | A | V | K | N | L | E | E |
Template Known Secondary structure |   |
S | S | T | T |  |  |  |
| G | G | G | S |
|  |  |  | G | G | G | T |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
272 | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
  |