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Job DescriptionQ46811
Confidence99.54%DateWed Jan 25 15:21:12 GMT 2012
Rank133Aligned Residues258
% Identity17%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   552.......560.........570.........580.........590.... .....600......
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Query Sequence  PVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIP. . . . . . . . . . . . . . . . . . . . . . . . . QFRIPAELIQHD
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Template Sequence  DAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYM
Template Known Secondary structure  S


STT



SS
GGGSGGGG

S




SSS


TS
S
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   910.........20.........30.........40.........50.........60.........70.........80........
 
   607..610.........620.........630.........640.........650.........660.........670.........680......
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Query Sequence  IDFVAAHGVKFEYGCSPDLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGA
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Template Sequence  CKTGPEAI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LELEHMGLPFSRLDDGRIYQRPFG
Template Known Secondary structure  ................................................TT



B
S
BTTB


SS
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   8990...... ...100.........110.........120
 
   687..690.........700.........710.........720.........730.........740.........750.........760......
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Query Sequence  GNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRR
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Template Sequence  GQS. . . . . . . . KNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGC. . . . . . . . . TAL
Template Known Secondary structure  B
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TTSSS

TT
TT

S
TTS
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   121.. ......130.........140.........150.........160.........170.........180 ...
 
   767..770.........780...... ...790.........800.........810 .........820
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Query Sequence  PVETNETVTLLVDSLITAIG. . . . . . . . . . . . . . . . . . . . . . . . . EQQDTEALNAMGVPLDKNGWPDVD. HNGETRLTDV
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Template Sequence  CIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMMGGIPTKVTGQALTVNEKGEDVVVPGL
Template Known Secondary structure  TTT

S





GGGSSS
SS
TT
S
TTT


B



BB
TT

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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   821....... .830.........840.........850.........860.........870....
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Query Sequence  FMIGDVQR. . . . . . . . . GPSSIVAAVGTARRATDAILSRENIRSHQNDKYWNNVNPAEIYQRK
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Template Sequence  FAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNR
Template Known Secondary structure 
SSS
SSSTTS

TT






T
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   384.....390.........400.........410.........420.........430.........440......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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