|   |
678 | . | 680 | |
|
. | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|  | . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
G | K | H | . |
. |
V | V | V | V | G | A | G | N | T | A | M | D | C | A | R | A | A | L | R | V | P | G | V | E | K | A | T | I | V | Y | R | R | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | E | M |
Query Conservation |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | S | H | V | P | F | L | L | I | G | G | G | T | A | A | F | A | A | A | R | S | I | R | A | R | D | P | G | A | R | V | L | I | V | S | E | D | P | E | L | P | Y | M | R | P | P | L | S | K | E | L | W | F | S | P | N | V | T | K | T | L | R | F | K | Q | W | N | G | K | E | R | S | I | Y | F | Q | P | P | S | F |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |  |  | S | S | S | S |
|
| B |
| S | G | G | G | G | T | G | G | G |
|
|
| T |  |  |  |  |
|  |  |  |
| T | T | S |
|  |  |  | S | B | S | S |
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
  |   |
718 | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | |
|
. | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
Query Sequence |   |
P | A | W | R | E | E | Y | E | E | A | L | H | D | G | V | E | F | R | F | L | N | N | P | E | R | F | D | A | D | G | T | L | T | L | R | V | M | S | L | G | E | P | D | E | K | G | R | R | R | P | V | E | T | N | E | T | V | T | L | L | V | D | S | L | I | T | A | I | G | E | Q | Q | D | T | E | . |
. |
A | L | N |
Query Conservation |   |
|
|   |   |
|
|
|   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |
| . | . |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |
Template Sequence |   |
Y | V | S | A | Q | D | L | P | H | I | E | N | G | G | V | A | V | L | T | G | K | K | V | V | Q | L | D | V | R | D | N | M | V | K | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | D | G | S | Q | I | T | Y | E | K | C | L | I | A | T | G | G | T | E | P | N | V | E | L | A | K | T |
Template Known Secondary structure |   |
S | B |
| T | T | T | T | T | T | S | T | T |
|  |  |  |  |  |  | T |
|
|  |  |  |  |  | G | G | G | T |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | S |
|  |  |  |  |  |  |  |  |  |
|
|
| B |
|
| B |
|
| T | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
796 | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | G | V | P | L | D | K | N | G | W | P | D | V | D | H | N | G | E | T | R | L | T | D | V | F | M | I | G | D | V | Q | R | G | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
S | I | V | A | A | V | G | T | A | R | R | A | T | D | A | I | L | S |
Query Conservation |   |
  |
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   | . | . | . | . | . | . | . | . | . |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   | . |   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |
|
Template Sequence |   |
G | G | L | E | I | D | S | D | F | G | G | F | R | V | N | A | E | L | Q | A | R | . |
S | N | I | W | V | A | G | D | A | A | C | F | Y | D | I | K | L | G | R | R | R | V | E | H | H | D | H | A | V | V | S | G | R | L | A | G | E | N | M | T | G |
Template Known Secondary structure |   |
 | T |
|
| B |
| T | T | T |
| S |  |  |
|
| T | T |
|  |  |  | . | T | T |  |  |  |
| G | G | G |  |  |  |  |  | T | T | T |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | |
. | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
  |