Job Description Q46811 Confidence 99.56% Date Wed Jan 25 15:21:12 GMT 2012 Rank 131 Aligned Residues 293 % Identity 19% Template d1d3ga_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.60

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.		.	.	.	.	110	.	.
Predicted Secondary structure																																																																		.	.							.
Query SS confidence																																																																		.	.							.
Query Sequence		Y	S	P	V	K	G	K	T	V	S	V	F	G	E	T	C	A	T	P	V	G	P	A	A	G	P	H	T	Q	L	A	Q	N	I	V	T	S	W	L	T	G	G	R	F	I	E	L	K	T	V	Q	I	L	D	R	L	E	L	E	K	P	C	I	D	.	.	A	E	D	E	C	F	.	N	T	E	W	S	T	E
Query Conservation																																																																		.	.							.
Alig confidence																															.																																			.	.							.
Template Conservation																															.
Template Sequence		F	Q	D	S	D	M	L	E	V	R	V	L	G	H	K	F	R	N	P	V	G	I	A	A	G	F	D	K	H	.	G	E	A	V	D	G	L	Y	K	M	G	F	G	F	V	E	I	G	S	V	T	P	K	P	Q	E	G	N	P	R	P	R	V	F	R	L	P	E	D	Q	A	V	I	N	R	Y	G	F	N	S
Template Known Secondary structure						G	G	G					T	T				S	S	S					T	T	S	S	T	T	.	S	S	S								T		S									S	S		B			S		S							G	G	G	T										B
Template Predicted Secondary structure																															.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	L	L	K	A	W	D	E	Y	L	K	A	W	F	A	L	H	L	L	E	A	M	F	Q	P	S	D	S	G	K	S	F	I	F	N	M	S	V	G	Y	N	L	E	G	I	K	Q	P	P	M	Q	Q	F	I	D	N	M	M	D	A	S	D	H	P	K	F	A	Q	Y	R	D	T	L	N	K	L	L	Q	D
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	G	L	S	V	V	E	H	R	L	R	A	R	Q	Q	K	Q	A	K	L	T	E	.	.	.	.	.	.	.	.	D	G	L	P	L	G	V	N	L	G	K	N	K	T	S	.	.	V	D	A	A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T										.	.	.	.	.	.	.	.	T	T											T	T		.	.	S														G	G	G		S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.																.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.									.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	L	A	R	H	G	L	Q	E	K	R	E	S	L	Q	A	L	P	A	R	I	P	T	S	M	V	H	G	V	T	L	S	T	M	H	G	C	P	P	H	E	I	E	A	I	C	R	Y	M	L	E	E	K	G	L	N	T	F	V	K	L	N	P	T	L	L	G	Y	A	R	V	R	E	I	L	D	V	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	N	V	S	S	P	N	T	A	G	L	G	K	A	E	L	R	R	L	L	.	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	I	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			T	T	S	T	T											.									T	S		G	G	G										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		G	F	G	Y	I	G	L	K	E	E	S	F	D	H	D	L	K	L	T	Q	A	L	E	M	L	E	R	L	M	A	L	A	K	E	K	S	L	G	F	G	V	K	L	T	N	T	L	G	.	.	T	I	N	N	K	G	A	L	P	G	E	E	M	Y	M	S	G	R	A	L	F	P	L	S	I	N	V	A	A	V
Query Conservation																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	T	S	Q	D	K	E	D	I	A	S	V	V	K	E	L	G	.	.	.	.	.	I	D	G	L	I	V	T	N	T	T	V	S	R	P	A	G	L	Q	G	A	L	R	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T	Q	T	I	R	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	.	.	.	.	.										B	S				T	T				T	T	T	T	S	S	S					G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template SS confidence
																259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.						.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	S	R	A	F	D	G	K	L	P	I	S	Y	S	G	G	.	A	S	Q	L	T	I	R	D	I	F	D	T	G	I	R	P	I	T	M	A	T	D	L	L	K	P	G	G	Y	L	R	L	S	A	C	M	R	E	L	E
Query Conservation																		.
Alig confidence																		.																										.
Template Conservation																																												.
Template Sequence		M	Y	A	L	T	Q	G	R	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	.	W	G	P	P	V	V	G	K	V	K	R	E	L	E
Template Known Secondary structure						T	T	T		S						S	S			S											T		S					S						.			T
Template Predicted Secondary structure																																												.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions