Return to main results Retrieve Phyre Job Id

Job DescriptionQ46811
Confidence98.12%DateWed Jan 25 15:21:12 GMT 2012
Rank312Aligned Residues279
% Identity11%Templatec3oixA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.... .....110.........
Predicted Secondary structure 


































.







Query SS confidence 































































.














Query Sequence  GKTVSVFGETCATPVGPAAGPHTQLAQNIVTSWLTGGRFIELKTVQILDRLELEKPCIDAEDEC. FNTEWSTEFTLLKAW
Query Conservation                 





  

 

       
 
  
 



         


      . 
 


 
       
Alig confidence 












































.

















.














Template Conservation 

 
 
 
  
  

  

       
        
 
 

    .                            
     
Template Sequence  STHTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTTGT. LEERAGNPQPRYADTKLGSINSMGLPNLGINYYL
Template Known Secondary structure 


TTS
S
TTSS
SSTSS
SB
B

B
.SS
B

S
S


SS




BS
Template Predicted Secondary structure 




















.


















Template SS confidence 















































































   3......10.........20.........30.........40....... ..50.........60.........70.........80.
 
   120.........130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 

















Query SS confidence 















































































Query Sequence  DEYLKAWFALHLLEAMFQPSDSGKSFIFNMSVGYNLEGIKQPPMQQFIDNMMDASDHPKFAQYRDTLNKLLQDDAFLARH
Query Conservation   

 
                        




 
 

              
                          
Alig confidence 





.............















.........................................



Template Conservation        .............            
 
 .........................................    
Template Sequence  DYVTEL. . . . . . . . . . . . . QKQPDSKNHFLSLVGM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SPEE
Template Known Secondary structure  .............STT





S.........................................S
Template Predicted Secondary structure  .............








.........................................
Template SS confidence 















































































   83..... .90.........100.... ....
 
   200.........210.........220.........230.........240.........250.........260......... 270........
Predicted Secondary structure 


















.



Query SS confidence 





































































.








Query Sequence  GLQEKRESLQALPARIPTSMVHGVTLSTMHGCPPHEIEAICRYMLEEKGLNTFVKLNPTLLGYARVREIL. DVCGFGYIG
Query Conservation                          
 

 


   


 
         
    
 





    
  
.   
     
Alig confidence 





































































.








Template Conservation      
        
 

 
   
                              

                   
 
 
 
Template Sequence  THTILMVEASKYQGLVELNLSCPNVPGPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNYPLTFVN
Template Known Secondary structure 

TTTSS

S
S


S



GGG
TTT

S









S
Template Predicted Secondary structure 



































Template SS confidence 















































































   109110.........120.........130.........140.........150.........160.........170.........180........
 
   279280.........290.........300.........310.........320.........330.........340.........350........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  LKEESFDHDLKLTQALEMLERLMALAKEKSLGFGVKLTNTLGTINNKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGK
Query Conservation       
  

    
      
          




 

          
   

 

  
    
         
   
Alig confidence 



...............................












































Template Conservation    
 ............................... 
                    

       
  
          
Template Sequence  CINS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGNGLVIEDETVVIPKNGFGGIGGDYVKPTALANVHAFYKRLNPS
Template Known Secondary structure 


...............................
TT


GGGGGGTTS
TT
Template Predicted Secondary structure 

...............................



























Template SS confidence 















































































   192... ....200.........210.........220.........230.........240
 
   359360.........370.........380.........390.........400......
Predicted Secondary structure 




















Query SS confidence 















































Query Sequence  LPISYSGGASQLTIRDIFDTGIRPITMATDLLKPGGYLRLSACMRELE
Query Conservation 
  
   
    
       
    
  
  
 
 

           
Alig confidence 
































.













Template Conservation 
 


 


   

 
 
  




 


    . 
      
   
 
Template Sequence  IQIIGTGGVTGRDAFEHILCGASMVQIGTALHQ. EGPQIFKRITKELA
Template Known Secondary structure  SS


T
SS.
T

Template Predicted Secondary structure 






.

Template SS confidence 















































   242.......250.........260.........270.... .....280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions