Job Description Q46811 Confidence 99.96% Date Wed Jan 25 15:21:12 GMT 2012 Rank 70 Aligned Residues 294 % Identity 20% Template c3lzxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin--nadp reductase 2; PDBTitle: crystal structure of ferredoxin-nadp+ oxidoreductase from bacillus2 subtilis (form ii) Resolution 1.90 Å

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		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.											.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y	F	L	A	R	A	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K	N	I	I	P	Q	F	R	I	.	.	.	.	.	.	.	.	.	.	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	T	I	I	G	G	G	P	V	G	L	F	T	A	F	Y	G	G	M	R	Q	A	S	V	K	I	I	E	S	L	P	Q	L	G	G	Q	L	S	A	L	Y	P	E	K	Y	I	Y	D	V	A	G	F	P	K	I	R	A	Q	E	L	I	N	N	L	K	E	Q	M	A	K	F	D	Q	T	I	C	L	E	Q
Template Known Secondary structure									S													T	T								S	S	S	S	S									T	T	S					S	T	T		S	S															T	T	S							S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		622	.											.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	.	.	.	.	.	.	.	.	.	.	D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	D	N	Q	N	V	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	N	T	A	M
Query Conservation				.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation																																																								.
Template Sequence		A	V	E	S	V	E	K	Q	A	D	G	V	F	K	L	V	T	N	E	E	T	H	Y	S	K	T	V	I	I	T	A	G	N	G	A	F	K	P	R	K	L	E	L	E	N	A	E	Q	Y	E	G	K	N	L	.	H	Y	F	V	D	D	L	Q	K	F	A	G	R	R	V	A	I	L	G	G	G	D	S	A	V
Template Known Secondary structure										T	T	S							S	S													T	T	S										T	T	G	G	G	G	B	T	T	T		.		S	S				G	G	G	G	T	T	S							S	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	A	R	A	A	L	R	V	P	G	V	E	K	A	T	I	V	Y	R	R	S	L	Q	E	M	P	A	W	R	E	E	Y	E	E	A	L	H	D	G	V	E	F	R	F	L	N	N	P	E	R	F	D	A	D	G	T	L	T	L	R	V	M	S	L	G	E	P	D	E	K	G	R	R	R	P	V	E	T	N
Query Conservation
Alig confidence											.	.													.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.													.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	W	A	L	M	L	E	P	I	.	.	A	K	E	V	S	I	I	H	R	R	D	K	.	.	F	R	A	H	E	H	S	V	E	N	L	H	A	S	K	V	N	V	L	T	P	F	V	P	A	E	L	I	G	E	D	K	I	E	Q	L	V	L	E	E	.	.	.	.	.	.	.	.	.	.	.	V	K	G	D
Template Known Secondary structure								T	T	T	.	.	S	S							S	S	S	S	.	.		S	S											S	S					T	T									S	S	S									.	.	.	.	.	.	.	.	.	.	.	T	T	S	S
Template Predicted Secondary structure											.	.													.	.																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.												.	230	.	.
		772	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.				.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		E	T	V	T	L	L	V	D	S	L	I	T	A	I	G	E	Q	Q	D	T	E	A	L	N	A	M	G	V	P	L	D	K	N	G	W	P	D	V	D	H	N	G	E	T	R	L	T	D	V	F	M	I	G	D	V	Q	.	.	.	R	G	P	S	S	I	V	A	A	V	G	T	A	R	R	A	T	D	A	I	L
Query Conservation																																																										.	.	.
Alig confidence																																	.																									.	.	.
Template Conservation																																	.
Template Sequence		R	K	E	I	L	E	I	D	D	L	I	V	N	Y	G	F	V	S	S	L	G	P	I	K	N	W	G	L	D	I	E	.	K	N	S	I	V	V	K	S	T	M	E	T	N	I	E	G	F	F	A	A	G	D	I	C	T	Y	E	G	K	V	N	L	I	A	S	G	F	G	E	A	P	T	A	V	N	N	A	K
Template Known Secondary structure									S													G	G	G	G	G	S						.	T	T						T	T	S	B		S	S	T	T					G	G	G				T	T
Template Predicted Secondary structure																																	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		849	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	E	N	I	R	S	H	Q	N	D	K	Y	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	M	D	P	K	A	R	V	Q	P	L	H	S
Template Known Secondary structure						T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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