Return to main results Retrieve Phyre Job Id

Job DescriptionQ46811
Confidence95.17%DateWed Jan 25 15:21:12 GMT 2012
Rank500Aligned Residues32
% Identity13%Templatec3l4bG_
PDB info PDB header:transport proteinChain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima
Resolution3.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   552.......560.........570.........580...
Predicted Secondary structure 









Query SS confidence 































Query Sequence  PVAVIGAGPAGLAAGYFLARAGHPVTLFEREA
Query Conservation 














  


 
  





  
Alig confidence 































Template Conservation   




 
  
  

  
   
  




 
 
Template Sequence  KVIIIGGETTAYYLARSMLSRKYGVVIINKDR
Template Known Secondary structure 


TT

S
Template Predicted Secondary structure 








Template SS confidence 































   2.......10.........20.........30...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions