Job Description Q46811 Confidence 99.97% Date Wed Jan 25 15:21:12 GMT 2012 Rank 50 Aligned Residues 299 % Identity 19% Template c3kpgA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfide-quinone reductase, putative; PDBTitle: crystal structure of sulfide:quinone oxidoreductase from2 acidithiobacillus ferrooxidans in complex with decylubiquinone Resolution 2.30 Å

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		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.				.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.			.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																								.	.	.																				.	.																																	.	.
Query SS confidence																								.	.	.																				.	.																																	.	.
Query Sequence		H	P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y	F	L	A	R	A	.	.	.	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K	N	.	.	I	I	P	Q	F	R	I	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C	S	P	.	.
Query Conservation																								.	.	.																				.	.																																	.	.
Alig confidence																								.	.	.																				.	.																																	.	.
Template Conservation
Template Sequence		A	H	V	V	I	L	G	A	G	T	G	G	M	P	A	A	Y	E	M	K	E	A	L	G	S	G	H	E	V	T	L	I	S	A	N	D	Y	F	Q	F	V	P	S	N	P	W	V	G	V	G	W	K	E	R	D	D	I	A	F	P	I	R	H	Y	V	E	R	K	G	I	H	F	I	A	Q	S	A	E	Q	I
Template Known Secondary structure										S	T	T														T	T	S							S	S	S					G	G	G							T	S	S															T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
							624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.							.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																		.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence		.	.	.	.	.																																		.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		.	.	.	.	.	D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	D	N	.	.	.	.	.	.	Q	N	V	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	.	.	.	.	.
Query Conservation		.	.	.	.	.																																		.	.	.	.	.	.																																.	.	.	.	.
Alig confidence		.	.	.	.	.																						.												.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																												.
Template Sequence		D	A	E	A	Q	N	I	T	L	A	D	G	N	T	V	H	Y	D	Y	L	M	I	A	T	G	P	.	K	L	A	F	E	N	V	P	G	S	D	P	H	E	G	P	V	Q	S	I	C	T	V	D	H	A	E	R	A	F	A	E	Y	Q	A	L	L	R	E	P	G	P	I	V	I	G	A	M	A	G	A	S	C
Template Known Secondary structure			T	T	T	T					T	T	S						S									.				G	G	G	S	T	T		S	T	T	T	S	S					S	S																	S										T	T
Template Predicted Secondary structure																												.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
							688	.	690	.	.	.	.	.	.	.	.	.	700	.				.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.								.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
Predicted Secondary structure		.	.	.	.	.															.	.	.																					.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.															.	.	.																					.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	N	T	A	M	D	C	A	R	A	A	L	R	V	P	.	.	.	G	V	E	K	A	T	I	V	Y	R	R	S	L	Q	E	M	P	A	W	R	.	.	.	.	.	.	.	E	E	Y	E	E	A	L	H	D	G	V	E	F	R	F	L	N	N	P	E	R	F	D	A	D	G	T	L	T	L	R
Query Conservation		.	.	.	.	.															.	.	.																					.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	P	A	Y	E	Y	A	M	I	V	A	S	D	L	K	K	R	G	M	R	D	K	I	P	S	F	T	F	I	T	S	E	P	Y	I	G	H	L	G	I	Q	G	V	G	D	S	K	G	I	L	T	K	G	L	K	E	E	G	I	E	A	Y	T	N	C	K	V	T	K	V	E	D	N	K	M	Y	V	T	Q
Template Known Secondary structure																				T		G	G	G		S							S	S	S	S	T	T		T	T	T	T			T	T												T	T						S								T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.		.	.	.	.	.	820	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.															.	.	.
Query SS confidence																																																																.															.	.	.
Query Sequence		V	M	S	L	G	E	P	D	E	K	G	R	R	R	P	V	E	T	N	E	T	V	T	L	L	V	D	S	L	I	T	A	I	G	E	Q	Q	D	T	E	A	L	N	A	M	G	V	P	L	D	K	N	G	W	P	D	V	D	H	N	G	E	.	T	R	L	T	D	V	F	M	I	G	D	V	Q	R	.	.	.
Query Conservation																																																																.															.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																					.																								.															.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		V	D	E	K	G	E	T	.	.	.	.	.	.	.	.	.	.	.	I	K	E	M	V	L	P	V	K	F	G	M	M	I	P	A	F	K	G	V	.	P	A	V	A	G	V	E	G	L	C	N	P	G	G	F	V	L	V	D	E	H	Q	R	S	K	K	Y	A	N	I	F	A	A	G	I	A	I	A	I	P	P
Template Known Secondary structure				T	T	S			.	.	.	.	.	.	.	.	.	.	.									S												.					T	S	T	T	T	B		T	T	S		B		B		T	T	S	B	B	S	S		T	T					G	G	G	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		241	.	.	.	.	.	.												.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
											829	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	P	S	S	I	V	A	A	V	G	T	A	R	R	A	T	D	A	I	L	S	R	E	N	I	R	S	H	Q	N	D	K	Y	W
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	T	T	P	V	P	T	G	A	P	K	T	G	Y	M	I	E	S	M	V	S	A	A	V	H	N	I	K	A	D	L	E	G	R	K	G	E	Q	T	M	G	T
Template Known Secondary structure		S				S	S																										T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions