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Job DescriptionQ46811
Confidence99.96%DateWed Jan 25 15:21:12 GMT 2012
Rank54Aligned Residues297
% Identity16%Templatec3hyxC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:sulfide-quinone reductase; PDBTitle: 3-d x-ray structure of the sulfide:quinone oxidoreductase from aquifex2 aeolicus in complex with aurachin c
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  RHPVAVIGAGPAGLAAGYFLARAG. . HPVTLFEREANAGG. . VVKNIIPQFRIPAELIQHDIDFVAAHGVKFEYGCSP. .
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Template Sequence  AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI
Template Known Secondary structure 


SS
TT

SSS
GGGT
S
GGGGSTTTGGGGT
S
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   624.....630.........640.........650.........660.........670.........680.........690........
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Query Sequence  . . . . . DLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARAAL
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Template Sequence  DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSFGPAYE
Template Known Secondary structure  TTTTTT


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   699 700.........710......... 720.........730.........740.........750.........
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Query Sequence  R. . . . . . . . . . . . VPGVEKATIVYRRSLQEMPA. . . . . . . WREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEP
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Template Sequence  FALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK. . . . . . . . . . . .
Template Known Secondary structure  TT
GGG

SSSSTT
TTTT
STTTT
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   760.........770.........780.........790.........800. ........810.... .....820........
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Query Sequence  DEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMGVPL. . DKNGWPDVDHNGE. TRLTDVFMIGDVQR. . . . . . . .
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Template Sequence  . . . . VIYEDLNGNTHEVPAKFTMFMPSFQGP. EVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTP
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TTS

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   231........240.........250....... ..260.........270.........280.........290.........300.....
 
   829830.........840.........850.........860...
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Query Sequence  . . . . GPSSIVAAVGTARRATDAILSRENIRSHQNDKYWN
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Template Sequence  IPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDKYAPRLS
Template Known Secondary structure  S






TT






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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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