Job Description Q46811 Confidence 98.90% Date Wed Jan 25 15:21:12 GMT 2012 Rank 222 Aligned Residues 267 % Identity 17% Template c3gyeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, putative; PDBTitle: didydroorotate dehydrogenase from leishmania major Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	S	V	F	G	E	T	C	A	T	P	V	G	P	A	A	G	P	H	T	Q	L	A	Q	N	I	V	T	S	W	L	T	G	G	R	F	I	E	L	K	T	V	Q	I	L	D	R	L	E	L	E	K	P	C	I	D	A	E	D	E	C	F	N	T	E	W	S	T	E	F	T	L	L	K	A	W	D	E	Y
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	N	L	L	N	N	T	F	A	N	P	F	M	N	A	A	G	V	M	C	T	T	T	E	E	L	V	A	M	T	E	S	A	S	G	S	L	V	S	K	S	C	T	P	A	L	R	E	G	N	P	T	P	R	Y	Q	A	L	P	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T				S	S	S					T	T	S	S		S	S										S	S		S									S	S		B			S		S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	W	F	A	L	H	L	L	E	A	M	F	Q	P	S	D	S	G	K	S	F	I	F	N	M	S	V	G	Y	N	L	E	G	I	K	Q	P	P	M	Q	Q	F	I	D	N	M	M	D	A	S	D	H	P	K	F	A	Q	Y	R	D	T	L	N	K	L	L	Q	D	D	A	F	L	A	R	H	G	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	N	S	M	G	L	P	N	.	.	.	.	.	N	G	F	D	F	Y	L	A	Y	A	A	E	Q	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									B	.	.	.	.	.													T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										66	.	.	.	70	.	.	.	.						.	.	.	.	.	80	.	.	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		E	K	R	E	S	L	Q	A	L	P	A	R	I	P	T	S	M	V	H	G	V	T	L	S	T	M	H	G	C	P	P	H	E	I	E	A	I	C	R	Y	M	L	E	.	.	.	E	K	G	L	N	T	F	V	K	L	N	P	T	L	L	G	Y	A	R	V	R	E	I	L	D	V	C	G	F	G	Y	I	G	L
Query Conservation																																													.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.													.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	G	K	K	P	L	F	L	S	M	S	G	L	S	M	R	E	N	V	E	M	C	K	R	L	A	A	V	A	T	E	K	G	V	I	L	E	L	N	L	D	F	.	.	.	.	.	D	A	M	R	Q	C	L	T	A	V	S	E	V	Y	P	H	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T										S	S																													.	.	.	.	.																S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Template SS confidence
																	89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		K	E	E	S	F	D	H	D	L	K	L	T	Q	A	L	E	M	L	E	R	L	M	A	L	A	K	E	K	S	L	G	F	G	V	K	L	T	N	T	L	G	T	I	N	N	K	G	A	L	.	.	.	.	P	G	E	E	M	Y	M	S	G	R	A	L	F	P	L	S	I	N	V	A	A	V	L	S	R	A	F
Query Conservation																																																			.	.	.	.
Alig confidence																																																			.	.	.	.
Template Conservation
Template Sequence		F	G	V	K	M	P	P	Y	F	D	F	A	H	F	D	A	A	A	E	I	L	N	E	F	P	K	V	Q	F	I	T	C	I	N	S	I	G	N	G	L	V	I	D	A	E	T	E	S	V	V	I	K	P	K	Q	G	F	G	G	L	G	G	R	Y	V	L	P	T	A	L	A	N	I	N	A	F	Y	R	R	C
Template Known Secondary structure											S													T		T	T																		T	T	T	T			S		S	G	G	G	G						G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		356	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	G	K	L	P	I	S	Y	S	G	G	.	A	S	Q	L	T	I	R	D	I	F	D	T	G	I	R	P	I	T	M	A	T	D	L	L	K	P	G	G	Y	L	R	L	S	A	C	M	R	E	L	E
Query Conservation													.
Alig confidence			.										.																										.
Template Conservation			.																																				.
Template Sequence		P	.	G	K	L	I	F	G	C	G	G	V	Y	T	G	E	D	A	F	L	H	V	L	A	G	A	S	M	V	Q	V	G	T	A	L	Q	E	.	E	G	P	S	I	F	E	R	L	T	S	E	L	L
Template Known Secondary structure		T	.	T	S						S	S			S											T													.			T	T
Template Predicted Secondary structure			.																																				.
Template SS confidence
		242		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions