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Job DescriptionQ46811
Confidence98.56%DateWed Jan 25 15:21:12 GMT 2012
Rank272Aligned Residues179
% Identity15%Templatec3d4oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   549550.........560.........570........ .580.........590.........600.........610.... .....620.....
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Query Sequence  SRHPVAVIGAGPAGLAAGYFLARAGHPVTL. . FEREANAGGVVKNIIPQFRIPAELIQHDIDFVAAHG. VKFEYGCSPDL
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Template Sequence  TGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDFIGVTKXRIDEVDWNTVDAILLPISGTNEAGKVDTIFSNESIV
Template Known Secondary structure  TT

B
TT
S
TT


TT

GGG

GGG
S

TT


TT
B

BSS
S


B
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   626...630.........640.........650.........660 .........670.........680........
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Query Sequence  TIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVW. . . . . . . . . . . . . . . . . KSLPFLREYNKGTALKLGKHVVVVGAGN
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Template Sequence  LTEEXIEKTPNHCVVYSGISNTYLNQCXKKTNRTLVKLXERDDIAIYNSIPTAEGTIXXAIQHTDFTIHGANVAVLGLGR
Template Known Secondary structure 

TS
TT
SS

T
GGG

SS
STT


S
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   689690.........700.........710.........720.........730.......
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Query Sequence  TAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFL
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Template Sequence  VGXSVARKFAALGA. . KVKVGARESDLL. . . . . . . . ARIAEXGXEPFHI
Template Known Secondary structure  TT
..SS........TTSG
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   165....170........ .180.........190 .........200...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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