Job Description Q46811 Confidence 99.95% Date Wed Jan 25 15:21:12 GMT 2012 Rank 73 Aligned Residues 283 % Identity 23% Template c3ctyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of t. acidophilum thioredoxin reductase Resolution 2.35 Å

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		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.		.	.	.	.	.						.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																											.						.	.	.	.	.																											.	.
Query SS confidence																																											.						.	.	.	.	.																											.	.
Query Sequence		P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y	F	L	A	R	A	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K	N	I	.	I	P	Q	F	R	.	.	.	.	.	I	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C	S	P	.	.
Query Conservation																																											.						.	.	.	.	.																											.	.
Alig confidence																																											.						.	.	.	.	.																											.	.
Template Conservation
Template Sequence		D	V	V	I	V	G	A	G	A	A	G	F	S	A	A	V	Y	A	A	R	S	G	F	S	V	A	I	L	D	K	A	V	A	G	G	L	T	A	E	A	P	L	V	E	N	Y	L	G	F	K	S	I	V	G	S	E	L	A	K	L	F	A	D	H	A	A	N	Y	A	K	I	R	E	G	V	E	V	R	S	I
Template Known Secondary structure									S													T	T								S	S	S	T	T	G	G	G	G	G		S		B			B	T	T	B	S	S	B															T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
								624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	D	N	Q	N	V	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	N	T	A	M	D	C	A	R	A	A
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																						.																									.	.
Template Conservation																													.																									.	.
Template Sequence		K	K	T	Q	G	G	F	D	I	E	T	N	D	D	T	Y	H	A	K	Y	V	I	I	T	T	G	T	.	T	H	K	H	L	G	V	K	G	E	S	E	Y	F	G	K	G	T	S	Y	C	S	T	C	.	.	D	G	Y	L	F	K	G	K	R	V	V	T	I	G	G	G	N	S	G	A	I	A	A	I	S	M
Template Known Secondary structure					T	T							S	S	S														.								B	T	T	T	T	T	B	T	T	T			S					.	.		G	G	G	G	B	T	S								S
Template Predicted Secondary structure																													.																									.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	P	G	V	E	K	A	T	I	V	Y	R	R	S	L	Q	E	M	P	A	W	R	E	E	Y	E	E	A	L	H	D	G	V	E	F	R	F	L	N	N	P	E	R	F	D	A	D	G	T	L	T	L	R	V	M	S	L	G	E	P	D	E	K	G	R	R	R	P	V	E	T	N	E	T	V	T	L	L
Query Conservation
Alig confidence					.	.													.	.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.													.	.																																						.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	Y	.	.	V	K	N	V	T	I	I	E	Y	M	P	K	.	.	Y	M	C	E	N	A	Y	V	Q	E	I	K	K	R	N	I	P	Y	I	M	N	A	Q	V	T	E	I	V	G	D	G	K	K	V	T	G	V	.	.	.	.	.	.	.	.	.	.	K	Y	K	D	R	T	T	G	E	E	K	L	I	E
Template Known Secondary structure		T	T	T	.	.	B	S							S	S	S	S	.	.			S											T	T						S									S	S	S	S					.	.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure					.	.													.	.																																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.			.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240
		778	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.		830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		V	D	S	L	I	T	A	I	G	E	Q	Q	D	T	E	A	L	N	A	M	G	V	P	L	D	K	N	G	W	P	D	V	D	H	N	G	E	T	R	L	T	D	V	F	M	I	G	D	V	Q	R	G	.	P	S	S	I	V	A	A	V	G	T	A	R	R	A	T	D	A	I	L	S	R	E
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		T	D	G	V	F	I	Y	V	G	L	I	P	Q	T	S	F	L	K	D	S	G	V	K	L	D	E	R	G	Y	I	V	V	D	S	R	Q	R	T	S	V	P	G	V	Y	A	A	G	D	V	T	S	G	N	F	A	Q	I	A	S	A	V	G	D	G	C	K	A	A	L	S	L	Y	S	D	S
Template Known Secondary structure			S													G	G	G	T	T	S				B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B	T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions