 |
| Job Description | Q46811 | | Confidence | 98.01% | Date | Wed Jan 25 15:21:12 GMT 2012 |
| Rank | 325 | Aligned Residues | 60 |
| % Identity | 28% | Template | c2zvsB_ |
| PDB info |
PDB header:electron transport | Chain: B: PDB Molecule:uncharacterized ferredoxin-like protein yfhl; |
PDBTitle: crystal structure of the 2[4fe-4s] ferredoxin from escherichia coli
|
| Resolution | 1.65 Å |
|
| | |
896 | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | |
|
|
|
|
|
. | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | |
|
|
|
| | | | | | | | |
|
|
|
|
|  | | |  |
|
|
|
|
|
|
|
|
|
| | | | | | | |
|
| | | . | . | . | . | . | . |
| | | | |
|
|
|
|
|
|
|
|
|
|
|
|
| | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | R | C | L | E | C | N | Y | V | C | S | K | C | V | D | V | C | P | N | R | A | N | V | S | I | A | V | P | G | F | Q | N | R | F | Q | T | L | H | L | D | A | Y | C | N | E | C | . |
. |
. |
. |
. |
. |
G | N | C | A | Q | F | C | P | W | N | G | K | P | Y | K | D | K | I | T | V | F | S | L | A | Q |
| Query Conservation | |
|
|
|
| |
|
| | |
| | |
|
| |
|
|
| | |
|
| | | | |
| | | | | | | | | |
| | | | | |
| |
|
| . | . | . | . | . | . |
| |
|
|
| |
|
| | | | |
|
| |
|
| |
| |
| | | | |
| Alig confidence | |
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
| |
| | . | . | . | . | |
| | | |
|
| | |
|
| | | . | . | . | . | . | . | . | | | | | | |
| | | | |
| | |
| | | | | | |
| |
| | |
|
|
| | |
|
| | | | | | | | | | | | | |
| Template Sequence | |
K | K | C | I | N | C | D | . |
. |
. |
. |
M | C | E | P | E | C | P | N | E | A | I | S | M | . |
. |
. |
. |
. |
. |
. |
G | D | H | I | Y | E | I | N | S | D | K | C | T | E | C | V | G | H | Y | E | T | P | T | C | Q | K | V | C | P | I | P | N | T | I | V | K | D | P | A | H | V | E | T | E | E | Q |
| Template Known Secondary structure | |
T | T |
|
|
|
|
| . | . | . | . | S | S | G | G | G |
| T | T |
|
| | |
| . | . | . | . | . | . | . |
| S | S | S |
| | |
| T | T | T |
|
| T | T | T | T | T |
| S | S |
| | | | | |
| S | S |
|
| | | |
| T | T | S |
|
|
| | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
| . | . | . | . | | | | | | |
|
|
|
| | | | . | . | . | . | . | . | . | |
|
| | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
| | | | |
|
|
|
|
| | | |
|
|
|
|
|
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
6 | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
