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Job DescriptionQ46811
Confidence100.00%DateWed Jan 25 15:21:12 GMT 2012
Rank19Aligned Residues291
% Identity14%Templatec2v3aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:rubredoxin reductase; PDBTitle: crystal structure of rubredoxin reductase from pseudomonas2 aeruginosa.
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   550.........560.........570..... ....580....... ..590.........600.... .....610.........620...
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Query Sequence  RHPVAVIGAGPAGLAAGYFLARAGHP. . VTLFEREANAGG. . . VVKNIIPQFRIPAELIQ. HDIDFVAAHGVKFEYGCSP
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Template Sequence  RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHTRV
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STT
SSS

SS



GGGGGGTTTTT


TT

S


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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   624.....630.........640.........650.........660.........670.........680.........690......
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Query Sequence  . . . . . . . DLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGKHVVVVGAGNTAMDCARA
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Template Sequence  TGIDPGHQRIWIGEEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFAND
Template Known Secondary structure 
GGGTTT
S







BSTTTT

SSTT



S
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   697..700.........710.........720......... 730.........740.........750.........760.........770.
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Query Sequence  ALRVPGVEKATIVYRRSLQEMPAWREEYEEALH. . . . . DGVEFRFLNNPERFDADGTLTLRVMSLGEPDEKGRRRPVETN
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Template Sequence  LSSG. . GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHL. . . . . . . . . . . . . . . . S
Template Known Secondary structure  T..T
SSSSSSTTTS
TTT
S

TT................T
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   164... ..170.........180.........190.........200.........210.........220.... .
 
   772.......780.........790.........800.........810.........820....... ..830.........840.......
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Query Sequence  ETVTLLVDSLITAIGEQQDTEALNAMGVPLDKNGWPDVDHNGETRLTDVFMIGDVQ. . . . RGPSSIVAAVGTARRATDAI
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Template Sequence  DGEVIPCDLVVSAVGLRPRTELAFAAGLAVN. . RGIVVDRSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTL
Template Known Secondary structure  TS
S
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TT

BS..SS
TT
B
SSTT
GGGTTB


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   226...230.........240.........250...... ...260.........270.........280.........290.........300...
 
   848.850.........860
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Query Sequence  LSRENIRSHQNDK
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Template Sequence  AGNPSQVAYGPMP
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   304.....310......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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