Job Description Q46811 Confidence 99.28% Date Wed Jan 25 15:21:12 GMT 2012 Rank 158 Aligned Residues 98 % Identity 22% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		I	Y	Q	R	N	A	L	P	A	I	T	G	H	I	C	D	H	Q	C	Q	Y	N	C	T	R	L	D	Y	D	S	A	L	N	I	R	E	L	K	K	V	A	L	E	K	G	W	D	E	.	Y	K	Q	R	W	H	K	P	A	G	S	G	S	R	H	P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y
Query Conservation																																																		.
Alig confidence													.	.	.	.																																		.
Template Conservation													.	.	.	.
Template Sequence		L	W	L	D	N	P	K	I	Q	L	T	.	.	.	.	F	E	A	T	L	Q	Q	L	E	A	P	Y	N	S	D	T	V	L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R
Template Known Secondary structure							T	T	B				.	.	.	.										T	T	G	G	G															T	T	S	S	S		S	S		B		S	S				S	S			S								S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	R	A	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A
Template Known Secondary structure						T	T								S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions