Job Description Q46811 Confidence 97.59% Date Wed Jan 25 15:21:12 GMT 2012 Rank 352 Aligned Residues 133 % Identity 15% Template c2f00A_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc Resolution 2.50 Å

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		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	G	S	G	S	R	H	P	V	A	V	I	G	A	G	P	A	G	L	A	A	.	G	Y	F	L	A	R	A	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K	N	I	I	P	Q	F	R	I	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C	S	P
Query Conservation																							.
Alig confidence																							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Sequence		P	E	X	R	R	V	R	H	I	H	F	V	G	I	G	G	A	G	X	G	G	I	A	E	V	L	A	N	E	G	Y	Q	I	S	G	S	D	L	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	T	Q	Q	L	X	N	L	G	A	T	I	Y	F	N	.	.	.
Template Known Secondary structure					T	T								T	T	T	S	T	T											T	T								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T					S	S	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.																					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.			.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.				.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																																			.	.	.
Query SS confidence																																	.	.																																			.	.	.
Query Sequence		D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	.	.	D	N	Q	N	V	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	N	.	.	.	T	A	M	D	C	A	R	A	A	L
Query Conservation																																	.	.																																			.	.	.
Alig confidence		.							.	.																							.	.																.	.	.	.	.	.														.	.	.
Template Conservation		.							.	.																																								.	.	.	.	.	.
Template Sequence		.	H	R	P	E	N	V	.	.	R	D	A	S	V	V	V	V	S	S	A	I	S	A	D	N	P	E	I	V	A	A	H	E	A	R	I	P	V	I	R	R	A	E	X	L	A	E	L	.	.	.	.	.	.	X	R	F	R	H	G	I	A	I	A	G	T	H	G	K	T	T	T	T	A	X	V	S	S	I	Y
Template Known Secondary structure		.			G	G	G	G	.	.	T	T		S						T	T			T	T										T	T														.	.	.	.	.	.		T	T	S							S	S	S
Template Predicted Secondary structure		.							.	.																																								.	.	.	.	.	.
Template SS confidence
			71	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		699	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	P	G	V	E	K	A	T	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	A	G	L	D	P	T	F	V	N
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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