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Job DescriptionQ46811
Confidence99.96%DateWed Jan 25 15:21:12 GMT 2012
Rank65Aligned Residues270
% Identity21%Templatec1y56A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:hypothetical protein ph1363; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   536...540.........550.........560.........570.........580.........590.... .....600.........610..
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Query Sequence  EYKQRWHKPAGSGSRHPVAVIGAGPAGLAAGYFLARAGHPVTLFEREANAGGVVKNIIP. . . QFRIPAELIQHDIDFVAA
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Template Sequence  QGYYDFHEEEIERVVVDVAIIGGGPAGIGAALELQQ. YLTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLN
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SGGGT
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   86...90.........100.........110.........120. ........130.........140.........150.........160....
 
   613......620... ......630.........640.........650.........660.........670.........
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Query Sequence  HGVKFEYGCSP. . . . . . . . . . . . . DLTIEQLKNQGFHYVLIATGTDKNSGVKLAGDNQNVWKSLPFLREYNKGTALKLGK
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Template Sequence  ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA. IDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGR
Template Known Secondary structure  TTTT



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TTTTSTTTS
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   171........180.........190.........200.........210..... ....220.........230.........240.........
 
   680.........690.........700.........710.........720.........730.........740.........750.........
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Query Sequence  HVVVVGAGNTAMDCARAALRVPGVEKATIVYRRSLQEMPAWREEYEEALHDGVEFRFLNNPERFDADGTLTLRVMSLGEP
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Template Sequence  KVAVTGSKADEVIQE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LERWGIDYVHIPNVKRVEGNEKVERVID. . . . .
Template Known Secondary structure  STT................................T

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   250.........260.... .....270.........280.........290..
 
   760.........770.........780.........790........ .800.........810.........820.........830.......
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Query Sequence  DEKGRRRPVETNETVTLLVDSLITAIGEQQDTEALNAMG. . VPLDKNGWPDVDHNGETRLTDVFMIGDVQRGPSSIVAAV
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Template Sequence  . . . . . . . . . . . MNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHRIKDGIYVAGSA. VSIKPHYANY
Template Known Secondary structure  ...........TT


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   293......300.........310.........320.........330.........340.........350 .........360
 
   838.840.........850......
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Query Sequence  GTARRATDAILSRENIRSH
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Template Sequence  LEGKLVGAYILKEFGYDAQ
Template Known Secondary structure  TT



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   361........370.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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