|   |
545 | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | |
. | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  | . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
A | G | S | G | S | R | H | P | V | A | V | I | G | A | G | P | A | G | L | A | A | G | Y | F | L | A | R | A | G | H | P | V | T | L | F | E | R | E | A | N | A | G | G | V | V | K | N | . |
I | I | P | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F |
Query Conservation |   |
  |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|   | . |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
R | Q | P | P | E | E | V | D | V | L | V | V | G | A | G | F | S | G | L | Y | A | L | Y | R | L | R | E | L | G | R | S | V | H | V | I | E | T | A | G | D | V | G | G | V | W | Y | W | N | R | Y | P | G | A | R | C | D | I | E | S | I | E | Y | C | Y | S | F | S | E | E | V | L | Q | E | W | N | W | T | E | R | Y |
Template Known Secondary structure |   |
|
|
|
| S |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| S | S | S | S | S |
| T |  |  |  |  |
|
|
| T | T |
| B |
| S | S |
| T | T | T | S | S |
|
| S |
|  |  |  |  |  |  |
|
|
|
| B | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
597 | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | |
|
. | . | . | 620 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | |
. | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . |  |  |  |
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | P | A | E | L | I | Q | H | D | I | D | F | V | A | A | H | G | V | K | . |
. |
F | E | Y | G | C | S | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | T | I | E | Q | L | K | N | Q | G | F | H | Y | V | L | I | A | T | G | T | . |
D | K | N | S | G | V | K | L | A | G | D | N | Q | N | V | W | K |
Query Conservation |   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |   |   |
|
|
| . | . |
|   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|
| . |   |   |   |
|   |
|   |
|
|
|
|   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |
|   |
|   |
Template Sequence |   |
A | S | Q | P | E | I | L | R | Y | I | N | F | V | A | D | K | F | D | L | R | S | G | I | T | F | H | T | T | V | T | A | A | A | F | D | E | A | T | N | T | W | T | V | D | T | N | H | G | D | R | I | R | A | R | Y | L | I | M | A | S | G | Q | L | S | V | P | Q | L | P | N | F | P | G | L | K | D | F | A | G | N |
Template Known Secondary structure |   |
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | G |  |  |
| S |
|
|  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |
|
|
| S |
|
|
|
|
|
|
|
|
| T | T | G | G | G |
|
| S |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
662 | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
S | L | P | F | L | R | E | Y | N | K | G | T | A | L | K | L | G | K | H | V | V | V | V | G | A | G | N | T | A | M | D | C | A | R | A | A | L | R | V | P | G | V | E | K | A | T | I | V | Y | R | R | S | L | Q | E | M | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|
| . |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|   |   | . | . |   |   |   |
|
|
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | Y | H | T | . |
G | N | W | P | H | E | P | V | D | F | S | G | Q | R | V | G | V | I | G | T | G | S | S | G | I | Q | V | S | P | Q | I | A | K | Q | . |
. |
A | A | E | L | F | V | F | Q | R | T | P | H | F | A | V | P | A | R | N | A | P | L | D | P | E | F | L | A | D | L | K | K | R | Y | A | E | F | R | E |
Template Known Secondary structure |   |
 |  |  | G | . | G | G |
|
| S | S |
|
|
|
| B | T |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | B | S |  |  |  |  |  |  | S | S |
|
|
|  |  |  |
|
|
|
| B |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
171 | . | . | . | |
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | |
|
. | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |
Template Sequence |   |
E | S | R | N | T | P | G | G | T | H | R | Y | Q | G | P | K | S | A | L | E | V | S | D | E | E | L | V | E | T | L | E | R | Y | W | Q | E | G | G | P | D | I | L | A | A | Y | R | D | I | L | R | D | R | D | A | N | E | R | V | A | E | F | I | R | N | K | I | R | N | T | V | R | D | P | E | V | A | E | R | L | V |
Template Known Secondary structure |   |
 |  |  | T | S | S | S | S | S |
|
|
|
|
|
| S |
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | G | G | G | G | G | S | S | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
719 | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | |
|
. | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | W | R | E | E | Y | E | E | A | L | H | D | G | V | E | F | R | F | . |
. |
L | N | N | P | E | R | F | D | A | D | G | T | L | T | L | R | V | M | S | L | G | E | P | D | E | K | G | R | R | R | P | V | E | T | N | E | T | V | T | L | L | V | D | S | L | I | T | A |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|   |   |
|   |
|
|
|
|   |
|   |   | . | . |   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |
|   |
|   |
|
|   |
|
Template Sequence |   |
P | K | G | Y | P | F | G | T | K | R | L | I | L | E | I | D | Y | Y | E | M | F | N | R | D | N | V | H | L | V | D | T | L | S | A | P | I | E | T | I | T | P | R | G | V | R | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | R | E | Y | E | L | D | S | L | V | L | A |
Template Known Secondary structure |   |
|
| S | S |
| S | S | S | S |
|
|  |  |  | S | S |  |  |  |  | T | T | S | T | T |  |  |  |  |  | T | T | T | S |
|  |  |  |  |
| S | S |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
|  |  |  |
| S |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
  |   |
785 | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | |
|
|
. | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | |
|
. | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
Query Sequence |   |
I | G | E | Q | Q | D | T | E | A | L | N | A | M | G | V | P | L | D | K | N | G | W | P | D | V | D | H | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | T | R | L | T | D | V | F | M | I | G | D | V | Q | R | G | P | . |
. |
. |
S | S | I | V | A | A | V | G | T | A | R | R | A | T | D | A | I | . |
. |
L | S |
Query Conservation |   |
|
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
| . | . | . |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
| . | . |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |
|   | . |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
T | G | F | D | A | L | T | G | A | L | F | K | I | D | I | R | . |
G | V | G | N | V | A | L | K | E | K | W | A | A | G | P | R | T | Y | L | G | L | S | T | A | G | F | P | N | L | F | F | I | A | G | P | G | S | P | S | A | L | S | N | M | L | V | S | I | E | Q | H | V | E | W | V | T | D | H | I | A | Y | M | F |
Template Known Secondary structure |   |
|
|
|
|
| T | T |  |  |  |  | T | S |  |  |  | . |
| G | G | G |
| B |  |  |  |  | T | T | T | S |
|
|
| B | T | T | T | B |
| T | T | S | T | T |  |  |  | S | S |
| T | T | S | S | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
387 | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | |
. | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . |
  |
  |   |
850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | N | I | R | S | H | Q | N | D | K | Y | W | N | N | V | N | P | A | E | I | Y | Q | R | K | G | D | I | S | I | T |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
K | N | G | L | T | R | S | E | A | V | L | E | K | E | D | E | W | V | E | H | V | N | E | I | A | D | E | T | L | Y | P |
Template Known Secondary structure |   |
 | T | T |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | G | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
466 | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
  |