Job Description Q46811 Confidence 100.00% Date Wed Jan 25 15:21:12 GMT 2012 Rank 4 Aligned Residues 280 % Identity 23% Template c1hyuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: crystal structure of intact ahpf Resolution 2.00 Å

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		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.								.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.																														.
Query SS confidence																																													.	.	.	.	.	.	.																														.
Query Sequence		P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y	F	L	A	R	A	G	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	V	K	N	I	I	P	.	.	.	.	.	.	.	Q	F	R	I	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C	S	P	.
Query Conservation																																													.	.	.	.	.	.	.																														.
Alig confidence																																	.	.											.	.	.	.	.	.	.																														.
Template Conservation																																	.	.
Template Sequence		D	V	L	I	V	G	S	G	P	A	G	A	A	A	A	V	Y	S	A	R	K	G	I	R	T	G	L	M	G	E	R	.	.	F	G	G	Q	V	L	D	T	V	D	I	E	N	Y	I	S	V	P	K	T	E	G	Q	K	L	A	G	A	L	K	A	H	V	S	D	Y	D	V	D	V	I	D	S	Q	S	A	S
Template Known Secondary structure									S													T	T								S	S	.	.	T	T	G	G	G	T	T		S		B			B	T	T	B	S	S	B															T	S							S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
														624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	D	N	Q	N	V	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	N	T	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																						.																									.	.
Template Conservation																																			.																									.	.
Template Sequence		K	L	V	P	A	A	T	E	G	G	L	H	Q	I	E	T	A	S	G	A	V	L	K	A	R	S	I	I	I	A	T	G	A	.	K	W	R	N	M	N	V	P	G	E	D	Q	Y	R	T	K	G	V	T	Y	C	P	H	C	.	.	D	G	P	L	F	K	G	K	R	V	A	V	I	G	G	G	N	S	G	V
Template Known Secondary structure							S	S	T	T	S							T	T	S															.								T	T	T	T	T	T	T	T	T	T					T	T		.	.		G	G	G	G	B	T	S								S
Template Predicted Secondary structure																																			.																									.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		D	C	A	R	A	A	L	R	V	P	G	V	E	K	A	T	I	V	Y	R	R	S	L	Q	E	M	P	A	W	R	E	E	Y	E	E	A	L	H	D	.	G	V	E	F	R	F	L	N	N	P	E	R	F	D	A	D	G	T	L	T	L	R	V	M	S	L	G	E	P	D	E	K	G	R	R	R	P	V	E	T
Query Conservation																																									.
Alig confidence											.	.													.	.															.																								.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.													.	.																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	A	I	D	L	A	G	I	.	.	V	E	H	V	T	L	L	E	F	A	P	E	.	.	M	K	A	D	Q	V	L	Q	D	K	V	R	S	L	K	N	V	D	I	I	L	N	A	Q	T	T	E	V	K	G	D	G	S	K	V	V	G	L	.	.	.	.	.	.	.	.	.	.	E	Y	R	D	R	V	S
Template Known Secondary structure											.	.	B	S							S	S	S	S	.	.			S									T	T		T	T						S										S	S	S					.	.	.	.	.	.	.	.	.	.					T	T	T
Template Predicted Secondary structure											.	.													.	.																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		369	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.											.	.	430	.	.	.	.
		771	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830		.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		N	E	T	V	T	L	L	V	D	S	L	I	T	A	I	G	E	Q	Q	D	T	E	A	L	N	A	M	G	V	P	L	D	K	N	G	W	P	D	V	D	H	N	G	E	T	R	L	T	D	V	F	M	I	G	D	V	Q	R	G	P	.	S	S	I	V	A	A	V	G	T	A	R	R	A	T	D	A	I	L	S
Query Conservation																																																														.
Alig confidence																											.																																			.
Template Conservation																											.
Template Sequence		G	D	I	H	S	V	A	L	A	G	I	F	V	Q	I	G	L	L	P	N	T	H	W	L	E	.	G	A	L	E	R	N	R	M	G	E	I	I	I	D	A	K	C	E	T	S	V	K	G	V	F	A	A	G	D	C	T	T	V	P	Y	K	Q	I	I	I	A	T	G	E	G	A	K	A	S	L	S	A	F	D
Template Known Secondary structure										S											S		G	G	G	T	.	T	T	S		B		T	T	S		B				T	T		B		S	S	T	T					S	T	T	B			S	S
Template Predicted Secondary structure																											.
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		850	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		514	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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