Job Description Q46811 Confidence 99.97% Date Wed Jan 25 15:21:12 GMT 2012 Rank 46 Aligned Residues 294 % Identity 19% Template c1fcdB_ PDB info PDB header:electron transport(flavocytochrome) Chain: B: PDB Molecule:flavocytochrome c sulfide dehydrogenase (flavin- PDBTitle: the structure of flavocytochrome c sulfide dehydrogenase2 from a purple phototrophic bacterium chromatium vinosum at3 2.5 angstroms resolution Resolution 2.53 Å

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		550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.			.	.	.	.	.	.	580	.	.	.	.	.	.	.	.		.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure																										.	.																.																																				.	.	.
Query SS confidence																										.	.																.																																				.	.	.
Query Sequence		R	H	P	V	A	V	I	G	A	G	P	A	G	L	A	A	G	Y	F	L	A	R	A	G	.	.	H	P	V	T	L	F	E	R	E	A	N	A	G	G	V	.	V	K	N	I	I	P	Q	F	R	I	P	A	E	L	I	Q	H	D	I	D	F	V	A	A	H	G	V	K	F	E	Y	G	C	S	P	.	.	.
Query Conservation																										.	.																.																																				.	.	.
Alig confidence																										.	.																.																																				.	.	.
Template Conservation
Template Sequence		G	R	K	V	V	V	V	G	G	G	T	G	G	A	T	A	A	K	Y	I	K	L	A	D	P	S	I	E	V	T	L	I	E	P	N	T	D	Y	Y	T	C	Y	L	S	N	E	V	I	G	G	D	R	K	L	E	S	I	K	H	G	Y	D	G	L	R	A	H	G	I	Q	V	V	H	D	S	A	T	G	I	D
Template Known Secondary structure											S	T	T										T	T		T	T	S							S		S	S				S	T	T	T						T	S	S		G	G	G	G				S						T	T						S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
						624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.								660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																					.	.	.	.	.	.	.																															.	.	.
Query SS confidence		.	.	.	.																																					.	.	.	.	.	.	.																															.	.	.
Query Sequence		.	.	.	.	D	L	T	I	E	Q	L	K	N	Q	G	F	H	Y	V	L	I	A	T	G	T	D	K	N	S	G	V	K	L	A	G	D	N	Q	N	V	.	.	.	.	.	.	.	W	K	S	L	P	F	L	R	E	Y	N	K	G	T	A	L	K	L	G	K	H	V	V	V	V	G	A	G	N	T	.	.	.
Query Conservation		.	.	.	.																																					.	.	.	.	.	.	.																															.	.	.
Alig confidence		.	.	.	.																						.															.	.	.	.	.	.	.																															.	.	.
Template Conservation																											.
Template Sequence		P	D	K	K	L	V	K	T	A	G	G	A	E	F	G	Y	D	R	C	V	V	A	P	G	I	.	E	L	I	Y	D	K	I	E	G	Y	S	E	E	A	A	A	K	L	P	H	A	W	K	A	G	E	Q	T	A	I	L	R	K	Q	L	E	D	M	A	D	G	G	T	V	V	I	A	P	P	A	A	P	F	R
Template Known Secondary structure			T	T	T						T	S						S									.					T	T	S	T	T			T	T	G	G	G	T	S					S														S	S		T	T										S	S		B
Template Predicted Secondary structure																											.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
										690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.		.	.	.	.	720	.	.	.	.	.	.	.	.	.						730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																											.															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																											.															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	M	D	C	A	R	A	A	L	R	V	P	G	V	E	K	A	T	I	V	Y	R	R	S	L	Q	.	E	M	P	A	W	R	E	E	Y	E	E	A	L	H	.	.	.	.	.	D	G	V	E	F	R	F	L	N	N	P	E	R	F	D	A	D	G	T	L	T	L	R	V	M	S
Query Conservation		.	.	.	.	.	.	.	.																											.															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																											.															.	.	.	.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		C	P	P	G	P	Y	E	R	A	S	Q	V	A	Y	Y	L	K	A	H	K	P	M	S	K	V	I	I	L	D	S	S	Q	T	F	S	K	Q	S	Q	F	S	K	G	W	E	R	L	Y	G	F	G	T	E	N	A	M	I	E	W	H	P	G	P	D	S	A	V	V	K	V	D	G	G	E	M	M	.	.	.	.
Template Known Secondary structure			T	T																		T	T								S		S	S		T	T														T	T	T	T	T		S						T	T	T	T				S				T	T	T		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.		.	.	.	.	.	820	.	.	.	.	.	.	.	.	.				830	.
Predicted Secondary structure																																																													.																.	.	.
Query SS confidence																																																													.																.	.	.
Query Sequence		L	G	E	P	D	E	K	G	R	R	R	P	V	E	T	N	E	T	V	T	L	L	V	D	S	L	I	T	A	I	G	E	Q	Q	D	T	E	A	L	N	A	M	G	V	P	L	D	K	N	G	W	P	D	V	D	H	N	G	E	.	T	R	L	T	D	V	F	M	I	G	D	V	Q	R	G	.	.	.	P	S
Query Conservation																																																													.																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.																								.																.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	E	T	A	F	G	D	E	F	K	A	D	V	I	N	L	I	P	P	Q	R	A	G	.	K	I	A	Q	I	A	G	L	T	N	D	A	G	W	C	P	V	D	I	K	T	F	E	S	S	I	H	K	G	I	H	V	I	G	D	A	S	I	A	N	P	M	P	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.				T	T							S												.							T			B	T	T	T	B	B		B		S	S	S		B	B	S	S	S	T	T					G	G	G	B			S	S	S		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
														237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	V	A	A	V	G	T	A	R	R	A	T	D	A	I	L	S	R	E	N	I	R	S	H	Q	N	D	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	Y	S	A	N	S	Q	G	K	V	A	A	A	A	V	V	V	L	L	K	G	E	E	P	G	T	P	S	Y
Template Known Secondary structure		S																				T	T								B
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions