 |
Job Description | Q46811 | Confidence | 96.65% | Date | Wed Jan 25 15:21:12 GMT 2012 |
Rank | 401 | Aligned Residues | 50 |
% Identity | 22% | Template | c1dwlA_ |
PDB info |
PDB header:electron transfer | Chain: A: PDB Molecule:ferredoxin i; |
PDBTitle: the ferredoxin-cytochrome complex using heteronuclear nmr2 and docking simulation
|
Resolution | UNK |
|
 |
  |   |
894 | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | A | R | C | L | E | C | N | Y | V | C | S | K | C | V | D | V | C | P | N | R | A | N | V | S | I | A | V | P | G | F | Q | N | R | F | Q | T | L | H | L | D | A | Y | C | N | E | C | G | N | C | A | Q | F | C | P | W | N |
Query Conservation |   |
|
|   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|
|
| . | . | . | . |   |
|   |   |   |
|
|   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
D | H | E | E | C | I | G | C | E | . |
. |
. |
. |
S | C | V | E | L | C | P | E | V | . |
. |
. |
. |
F | A | M | I | D | G | E | E | K | A | M | V | T | A | P | D | S | T | A | E | C | A | Q | D | A | I | D | A | C | P | V | E |
Template Known Secondary structure |   |
S | S |
|
|
| S | S |
|
| . | . | . | . | G | G | G | G | T | S | T | T | T | . | . | . | . |  |  |  |  |  |
| S | S |
|  |  |  | S |
| T | T |
|
|
| G | G | G | G | T | G | G | G | G | S | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | |
|
|
|
. | . | . | . | . | . | 20 | . | . | |
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|