 |
Job Description | P0ACM5 | Confidence | 73.27% | Date | Thu Jan 5 11:18:32 GMT 2012 |
Rank | 300 | Aligned Residues | 31 |
% Identity | 13% | Template | d1vola2 |
SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
|
Resolution | 2.70 |
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | G | N | I | L | P | G | E | R | D | L | S | Q | L | T | G | V | S | R | I | T | V | R | K | A | M | Q | A | L | E | E | E |
Query Conservation |   |
  |
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |   |   |
Template Sequence |   |
S | A | E | K | R | . |
T | Q | K | E | I | G | D | I | A | G | V | A | D | V | T | I | R | Q | S | Y | R | L | I | Y | P | R |
Template Known Secondary structure |   |
S | S | S |
|
| . |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
265 | . | . | . | . | |
270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|