Job Description P0ACM5 Confidence 81.32% Date Thu Jan 5 11:18:32 GMT 2012 Rank 269 Aligned Residues 56 % Identity 18% Template d1ldja1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain SCF ubiquitin ligase complex WHB domain Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		R	I	L	A	A	D	N	T	P	L	Y	I	K	F	A	E	T	V	K	N	A	V	R	S	G	V	L	E	H	G	N	I	L	P	G	E	R	D	L	S	Q	L	T	G	V	S	R	I	T	V	R	K	A	M	Q	A	L	E	E	E	G	V	V	T	R	.	S	R	G	Y	G	T	Q	I
Query Conservation																																																																			.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	M	K	M	R	K	V	L	K	H	Q	Q	L	L	G	E	V	L	T	Q	L	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	K	P	R	V	P	V	I	K	K	C	I	D	I	L	I	E	K	E	Y	L	E	R	V	D	G	E	K	D	T	Y	S
Template Known Secondary structure							S	S																T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T	T	S					S	S	S	T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		717	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740																		.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions