Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACM5
Confidence30.68%DateThu Jan 5 11:18:32 GMT 2012
Rank488Aligned Residues46
% Identity7%Templated1d5ya1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.....
Predicted Secondary structure 
















Query SS confidence 

















































Query Sequence  IKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEG
Query Conservation   

   
   
  
 
  
  



 


   



 


 

  
   
Alig confidence 













...




.


























Template Conservation     
     

   ...    
. 
  

     
   
 
 

   
 
Template Sequence  AGIIRDLLIWLEGH. . . LDQPL. SLDNVAAKAGYSKWHLQRMFKDVTGHA
Template Known Secondary structure  TT...SSSS
.

TTTSS
SS
Template Predicted Secondary structure  ...




.






Template SS confidence 

















































   4.....10....... ..20.. .......30.........40.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions