Job Description P0ACM5 Confidence 100.00% Date Thu Jan 5 11:18:32 GMT 2012 Rank 3 Aligned Residues 222 % Identity 24% Template c3f8mA_ PDB info PDB header:transcription Chain: A: PDB Molecule:gntr-family protein transcriptional regulator; PDBTitle: crystal structure of phnf from mycobacterium smegmatis Resolution 1.80 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	I	K	F	A	E	T	V	K	N	A	V	R	S	G	V	L	E	H	G	N	I	L	P	G	E	R	D	L	S	Q	L	T	G	V	S	R	I	T	V	R	K	A	M	Q	A	L	E	E	E	G	V	V	T	R	S	R	G	Y	G	T	Q	I	N	N	I	F	E	Y	S	L	K	E	A	R	G	F	S	Q
Query Conservation
Alig confidence																		.																																																			.
Template Conservation																		.																																																			.
Template Sequence		L	K	H	Q	V	V	R	A	E	L	D	R	M	L	D	G	.	M	R	I	G	D	P	F	P	A	E	R	E	I	A	E	Q	F	E	V	A	R	E	T	V	R	Q	A	L	R	E	L	L	I	D	G	R	V	E	R	R	G	R	T	T	V	V	A	R	P	K	.	I	R	Q	P	L	G	M	G	S	Y	T	E
Template Known Secondary structure																		.			T	T		B											T	T																T	T	S					T	T									.					S	S	S	S
Template Predicted Secondary structure																		.																																																			.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		Q	V	V	L	R	G	K	K	P	D	T	L	W	V	N	K	R	V	V	K	C	P	E	E	V	A	Q	Q	L	A	V	E	A	G	S	D	V	F	L	L	K	R	I	R	Y	V	D	E	E	A	V	S	I	E	E	S	W	V	P	A	H	L	I	H	D	V	.	.	.	D	A	I	G	I	S	L	Y	D	Y	F
Query Conservation																																																																				.	.	.
Alig confidence																																																																				.	.	.
Template Conservation
Template Sequence		A	A	K	A	Q	G	L	S	A	G	R	I	L	V	A	W	S	D	L	T	A	D	E	V	L	A	G	V	L	G	V	D	V	G	A	P	V	L	Q	L	E	R	V	L	T	T	D	G	V	R	V	G	L	E	T	T	K	L	P	A	Q	R	Y	P	G	L	R	E	T	F	D	H	E	A	S	L	Y	A	E	I
Template Known Secondary structure					T	T	T																								T			T	T													T	T												G	G	G		T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	Q	H	I	Y	P	Q	R	T	R	S	R	V	S	A	R	M	P	D	A	E	F	Q	S	H	I	Q	L	D	S	K	I	P	V	L	V	I	K	Q	V	A	L	D	Q	Q	Q	R	P	I	E	Y	S	I	S	H	C	R	S	D	L	Y	V	F	V	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	R	G	I	A	F	T	R	T	V	D	T	I	D	T	A	L	P	D	A	R	E	A	A	L	L	G	A	D	A	R	T	P	M	F	L	L	N	R	V	S	Y	D	Q	D	D	V	A	I	E	Q	R	R	S	L	Y	R	G	D	R	M	T	F	T	A	V
Template Known Secondary structure				T	T																								T			T	T													T	T	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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