Job Description P0ACM5 Confidence 100.00% Date Thu Jan 5 11:18:32 GMT 2012 Rank 2 Aligned Residues 215 % Identity 19% Template c3edpB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:lin2111 protein; PDBTitle: the crystal structure of the protein lin2111 (functionally unknown)2 from listeria innocua clip11262 Resolution 2.09 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	L	Y	I	K	F	A	E	T	V	K	N	A	V	R	S	G	V	L	E	H	G	N	I	L	P	G	E	R	D	L	S	Q	L	T	G	V	S	R	I	T	V	R	K	A	M	Q	A	L	E	E	E	G	V	V	T	R	S	R	G	Y	G	T	Q	I	N	N	I	F	E	Y	S	L	K	E	A	R	G	F
Query Conservation
Alig confidence																									.	.																																													.	.	.	.	.	.	.	.
Template Conservation																									.	.																																													.	.	.	.	.	.	.	.
Template Sequence		K	P	L	F	E	V	I	A	S	K	I	K	D	S	I	N	R	D	E	Y	K	T	G	.	.	X	P	N	E	T	A	L	Q	E	I	Y	S	S	S	R	T	T	I	R	R	A	V	D	L	L	V	E	E	G	L	V	V	R	K	N	G	V	G	L	Y	V	Q	P	K	.	.	.	.	.	.	.	.	L	T	A
Template Known Secondary structure																		T	T	S	S				.	.											T	T																T	T	S					T	T	T								.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.																																													.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.				170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		S	Q	Q	V	V	L	R	G	K	K	P	D	T	L	W	V	N	K	R	V	V	K	C	P	E	E	V	A	Q	Q	L	A	V	E	A	G	S	D	V	F	L	L	K	R	I	R	Y	V	D	E	E	A	V	S	I	E	E	S	W	V	P	A	H	L	I	H	D	V	.	.	.	D	A	I	G	I	S	L	Y	D
Query Conservation																																																																						.	.	.
Alig confidence																																																				.																		.	.	.
Template Conservation																																																				.
Template Sequence		Q	N	I	L	E	X	T	G	V	X	L	K	K	D	I	K	D	F	Y	I	R	K	A	G	K	F	Y	A	E	I	F	G	X	K	E	N	E	L	V	Y	S	I	K	F	V	Q	K	S	E	H	.	G	A	T	L	D	R	L	I	L	P	L	G	L	Y	P	D	L	Q	A	K	D	F	Q	I	I	N	I	I	E
Template Known Secondary structure																																	T	S		T	T	S												T	T	.											G	G	G	S	T	T			G	G	G				S
Template Predicted Secondary structure																																																				.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	F	R	S	Q	H	I	Y	P	Q	R	T	R	S	R	V	S	A	R	M	P	D	A	E	F	Q	S	H	I	Q	L	D	S	K	I	P	V	L	V	I	K	Q	V	A	L	D	Q	Q	Q	R	P	I	E	Y	S	I	S	H	C	R	S	D	L	Y	V	F	V	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	N	S	G	K	Y	K	L	F	E	L	E	Q	E	L	Q	L	I	L	A	G	N	E	Q	I	K	N	X	H	L	N	E	N	D	P	V	F	K	L	S	S	V	F	Y	A	E	N	D	X	P	I	A	I	Q	Y	H	Y	E	D	A	E	S	T	K	Y	V	V	D
Template Known Secondary structure				T	T	S	S	S																										T	T													T	T	T															S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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