Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACM5
Confidence100.00%DateThu Jan 5 11:18:32 GMT 2012
Rank1Aligned Residues217
% Identity19%Templatec3bwgA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:uncharacterized hth-type transcriptional regulator yydk; PDBTitle: the crystal structure of possible transcriptional regulator yydk from2 bacillus subtilis subsp. subtilis str. 168
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  IKFAETVKNAVRSGVLEHGNILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFSQQV
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Template Sequence  QQIATEIETYIEEHQLQQGDKLPVLETLXAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYISLLSN. . . .
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   5....10.........20.........30.........40.........50.........60.........70.........80
 
   106...110.........120.........130.........140.........150.........160......... 170.........180...
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Query Sequence  VLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESWVPAHLIHDV. . DAIGISLYDYFRSQ
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Template Sequence  . QGDFNVTSKVIELDVRKPTPEAAENLNIGXDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVSHSIFHYIREG
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   81........90.........100.........110.........120.........130.........140.........150.........
 
   184.....190.........200.........210.........220.........230.........240.......
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Query Sequence  . HIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVIKQVALDQQQRPIEYSISHCRSDLYVFVCE
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Template Sequence  LGLKIGFSDLFLHVGQLNEEEAEYLGLEAGLPKLYIESIFHLTNGQPFDYSKISYNYEQSQFVVQ
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   166...170.........180.........190.........200.........210.........220.........230
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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