Job Description P0ACM5 Confidence 79.01% Date Thu Jan 5 11:18:32 GMT 2012 Rank 279 Aligned Residues 67 % Identity 19% Template c2xznT_ PDB info PDB header:ribosome Chain: T: PDB Molecule:rps19e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.															.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		Y	I	K	F	A	E	T	V	K	N	A	V	R	S	G	V	L	E	H	G	N	I	L	P	G	E	R	D	L	S	Q	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	R	I	T	V	R	K	A	M	Q	A	L	E	E	E	G	V	V	T	R	S	R	G	.	.	.	.	.	Y	G	T
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		Y	I	R	T	A	A	L	A	R	K	V	Y	L	K	P	H	T	.	.	.	.	.	.	.	G	I	S	T	L	K	H	I	F	G	S	N	K	D	R	G	N	L	R	N	K	H	Q	A	C	H	G	K	I	L	R	W	A	L	K	S	L	E	D	L	K	I	I	R	K	D	K	N	S	A	T	K	K	F	S	R
Template Known Secondary structure															S	T	T		.	.	.	.	.	.	.									T							S	S	S																						T	T	S					S	S		S	S	S	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.								.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		86	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	N	N	I	F	E	Y	S	L	K	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	T	K	E	G	M	T	E	L	N	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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