Job Description P0ACM5 Confidence 96.70% Date Thu Jan 5 11:18:32 GMT 2012 Rank 58 Aligned Residues 78 % Identity 10% Template c2gauA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, crp/fnr family; PDBTitle: crystal structure of transcriptional regulator, crp/fnr family from2 porphyromonas gingivalis (apc80792), structural genomics, mcsg Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																											.	.	.			.
Query SS confidence																																											.	.	.			.
Query Sequence		T	Q	L	I	A	Q	L	N	E	R	I	L	A	A	D	N	T	P	L	Y	I	K	F	A	E	T	V	K	N	A	V	R	S	G	V	L	E	H	G	N	I	.	.	.	L	P	.	G	E	R	D	L	S	Q	L	T	G	V	S	R	I	T	V	R	K	A	M	Q	A	L	E	E	E	G	V	V	T	R	S	R
Query Conservation																																											.	.	.			.
Alig confidence																																											.	.	.			.
Template Conservation
Template Sequence		A	K	E	L	G	Y	A	E	R	R	T	V	T	L	T	Q	K	H	V	R	G	R	L	A	E	T	L	L	I	L	K	E	N	F	G	F	E	N	D	G	A	T	L	S	I	Y	L	S	R	E	E	L	A	T	L	S	N	M	T	V	S	N	A	I	R	T	L	S	T	F	V	S	E	R	M	L	A	L	D	G
Template Known Secondary structure																		S																			B		T	T	S	S	B	B	S												T	T	S															T	T	S					T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		82	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		215	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions