Return to main results Retrieve Phyre Job Id

Job DescriptionP30147
Confidence27.55%DateThu Jan 5 11:46:08 GMT 2012
Rank267Aligned Residues59
% Identity12%Templated2gjpa2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110..... ....120.. .......130.........140..
Predicted Secondary structure 











...................
Query SS confidence 































. .






. . . . . . . . . . . . . . . . .



















Query Sequence  RDGVAAAIRYARALGNKKINCLVGKTPAGFSS. . EQIHATL. . . . . . . . . . . . . . . . . VENLRYAANMLMKEDILLLI
Query Conservation         
  
  

   
             ..       .................   
      
   

 
 
Alig confidence 































..






.................



















Template Conservation    

  

 

  


 

 
 

         

   
  
         

   

  

  

  

  





Template Sequence  WNRLRDDASNLRNRGITAIWIPPAWKGTSQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLESAIHALKNNGVQVYG
Template Known Secondary structure  T




SB
SSTT

STT
SBTT
SS
S
BTTBSS
SS

TT
Template Predicted Secondary structure 











































Template SS confidence 













































































   24.....30.........40.........50.........60.........70.........80.........90.........100.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions