Return to main results Retrieve Phyre Job Id

Job DescriptionP30147
Confidence84.12%DateThu Jan 5 11:46:08 GMT 2012
Rank98Aligned Residues212
% Identity13%Templated1wkya2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGRE
Query Conservation    
     
       
 
 
      
   


              
   

                          
Alig confidence 


.






































.....................................
Template Conservation   

.


            
   
   
 
 


         .....................................
Template Sequence  VMR. GINHGHAWYKDQATTAIEGIANTGANTVRIVLSDGGQWT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

.
GGG
GGGTTT
S

SSSS
.....................................
Template Predicted Secondary structure  .

















.....................................
Template SS confidence 















































































   52.. .....60.........70.........80.........90...
 
   81........90.........100.........110.........120.........130.........140.........150. ......
Predicted Secondary structure 

















...





Query SS confidence 






































































. . .





Query Sequence  EEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIP. . . GFHLTG
Query Conservation            
  
  

   
                       
      
   

 
 

        ...      
Alig confidence 


























..









































...





Template Conservation        

  
  
   

 



 
 ..                
  

      
 

   
 


            
Template Sequence  KDDIQTVRNLISLAEDNNLVAVLEVHD. . ATGYDSIASLNRAVDYWIEMRSALIGKEDTVIINIANEWFGSWDGAAWADG
Template Known Secondary structure 


TT

T..TTT


TGGGTTT
TTT

TT


SS
Template Predicted Secondary structure 






..




















Template SS confidence 















































































   94.....100.........110.........120 .........130.........140.........150.........160.........170.
 
   158.160.........170.........180.........190......... 200.........210.........220.........230..
Predicted Secondary structure 




















.....















Query SS confidence 









































. . . . .
































Query Sequence  TRQALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADK. . . . . IGHLQIADNPHRGEPGTGEINYDYLFKVIENSD
Query Conservation                      
  
                  .....
  

  
      

 
 

   

  
   
Alig confidence 









































.....








.....


















Template Conservation         

  
    
 
                          
 
 
 
 
  .....                   
Template Sequence  YKQAIPRLRNAGLNNTLMIDAAGWGQFPQSIHDYGREVFNADPQRNTMFSIHMYEY. . . . . AGGNASQVRTNIDRVLNQD
Template Known Secondary structure  TT

S

BTTTTBTT
TT

STT.....TSSSTTT
Template Predicted Secondary structure 































.....





Template SS confidence 















































































   172.......180.........190.........200.........210.........220....... ..230.........240......
 
   233......240. ........250........
Predicted Secondary structure 


.....





Query SS confidence 








. . . . .
















Query Sequence  YNGWVGCEY. . . . . KPQTTTEAGLRWMDPYR
Query Conservation 
 
    
 .....         
  
    
Alig confidence 

.





.....
















Template Conservation   
.
 




                     
Template Sequence  LA. LVIGEFGHRHTNGDVDESTIMSYSEQRG
Template Known Secondary structure 

.
STT

TT
Template Predicted Secondary structure 

.











Template SS confidence 






























   247. .250.........260.........270......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions