Job Description P30147 Confidence 31.71% Date Thu Jan 5 11:46:08 GMT 2012 Rank 241 Aligned Residues 152 % Identity 15% Template d1vpqa_ SCOP info TIM beta/alpha-barrel TM1631-like TM1631-like Resolution 2.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.										.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.															.								.	.																			.	.
Query SS confidence															.	.	.	.	.	.	.	.	.															.								.	.																			.	.
Query Sequence		M	L	R	F	S	A	N	L	S	M	L	F	G	.	.	.	.	.	.	.	.	.	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	.	G	F	R	G	V	E	F	.	.	M	F	P	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	.	.	K	L	E	H	T	L	H	N	L	P	A	G	D	W
Query Conservation															.	.	.	.	.	.	.	.	.															.								.	.																			.	.
Alig confidence									.						.	.	.	.	.	.	.	.	.															.								.	.																			.	.
Template Conservation									.
Template Sequence		M	V	Y	V	G	T	S	.	G	F	S	F	E	D	W	K	G	V	V	Y	P	E	H	L	K	P	S	Q	F	L	K	Y	Y	W	A	V	L	G	F	R	I	V	E	L	N	F	T	Y	Y	T	Q	P	S	W	R	S	F	V	Q	M	L	R	K	T	P	P	D	F	Y	F	T	V	K	T	P	G	S	V	T	H
Template Known Secondary structure								B	.		S			S	T	T	B	T	T	T	B		T	T			G	G	G								T	S											S	S	S	S	S										T	T	S		T	T
Template Predicted Secondary structure									.
Template SS confidence
		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		A	A	G	E	R	G	I	A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	.	.	.	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E
Query Conservation																																.	.	.
Alig confidence											.	.	.	.	.																	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	W	K	E	G	K	D	P	.	.	.	.	.	K	E	D	M	E	N	F	T	R	Q	I	E	P	L	I	E	E	Q	R	L	K	M	T	L	A	Q	F	P	F	S	F	K	F	S	.	.	.	.	.	.	.	.	.	.	.	R	K	N	V	E	Y	L	E	K	L	R	E	S	Y	P	Y	E	L	A	V	E
Template Known Secondary structure		T					T			S	.	.	.	.	.																	T	T											T	T					.	.	.	.	.	.	.	.	.	.	.																S
Template Predicted Secondary structure											.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.												.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	N	H	F	D	I	P	G	F	H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		F	R	H	Y	S	W	D	R	.	.	.	.	.	.	.	E	E	T	Y	E	F	L	R	N	H	G	I	T	F	V	V	V	D
Template Known Secondary structure				B	G	G	G		S	.	.	.	.	.	.	.											T
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.								.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions