Job Description P30147 Confidence 89.94% Date Thu Jan 5 11:46:08 GMT 2012 Rank 82 Aligned Residues 200 % Identity 7% Template c3qc3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.								.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.																	.	.
Query SS confidence																																			.	.	.	.	.	.	.																	.	.
Query Sequence		R	F	S	A	N	L	S	M	L	F	G	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	G	F	R	G	V	E	F	M	.	.	.	.	.	.	.	F	P	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	.	.	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R	G	I
Query Conservation																																			.	.	.	.	.	.	.																	.	.
Alig confidence								.																											.	.	.	.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.
Template Conservation								.																																																																	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	G	P	S	I	.	L	N	S	D	L	A	N	L	G	A	E	C	L	R	X	L	D	S	G	A	D	Y	L	H	L	D	V	X	D	G	H	F	V	P	N	I	T	F	G	H	P	V	V	E	S	L	R	K	Q	L	G	Q	D	P	F	F	D	X	H	X	X	V	S	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B		.	T	T	S		G	G	G											T	T		S								B	S	S	S	S	S		B																S	S	S									S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	P	G	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	Q	W	V	K	P	X	A	V	A	G	A	N	Q	Y	T	F	H	L	E	A	T	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	L	I	K	D	I	R	E	N	G	X	K	V	G	L	A	I	K	P	G	T	S	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.												T		S						G	G	G		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	T									T	T	S		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
															76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100															.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	E	L	T	N	T	M	T	Q	W	A	D	K	I	G	H	L	Q	I	A	D	N	P	H	R	G	E	P	G	T	G	E	I	N	Y	D	Y	L	F	K	V	I	E	N	S	D	Y
Query Conservation
Alig confidence		.	.	.	.																																																	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.																																																	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	V	E	Y	L	A	P	W	A	N	Q	I	D	X	A	L	V	X	T	V	E	P	G	F	G	G	Q	K	F	X	E	D	X	X	P	K	V	H	W	L	R	T	Q	F	P	S	L	D	I	.	.	.	.	.	.	.	.	E	V	D	G	G	V	G	P	D	T	V	.	H	K	C	A	E	A	G	A
Template Known Secondary structure		.	.	.	.	G	G	G	G	T	T	T	G	G	G	S	S						S	S		T	T		S	S					G	G	G												T	T				.	.	.	.	.	.	.	.				S	S		S	T	T	T		.							T
Template Predicted Secondary structure		.	.	.	.																																																	.	.	.	.	.	.	.	.												.
Template SS confidence
						125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.
		234	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		N	G	W	V	G	C	E	Y	.	K	P	Q	T	T	T	E	A	G	L	R	W	M	D	P
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		N	X	I	V	S	G	S	A	I	X	R	S	E	D	P	R	S	V	I	N	L	L	R	N
Template Known Secondary structure												T		S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions