Job Description P30147 Confidence 100.00% Date Thu Jan 5 11:46:08 GMT 2012 Rank 2 Aligned Residues 257 % Identity 46% Template c3ngfA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ap endonuclease, family 2; PDBTitle: crystal structure of ap endonuclease, family 2 from brucella2 melitensis Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	R	F	S	A	N	L	S	M	L	F	G	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	G	F	R	G	V	E	F	M	F	P	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R	G	I	A	C	I	P	G	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	R	F	A	A	N	L	S	T	M	F	N	E	V	P	F	L	E	R	F	R	L	A	A	E	A	G	F	G	G	V	E	F	L	F	P	Y	D	F	D	A	D	V	I	A	R	E	L	K	Q	H	N	L	T	Q	V	L	F	N	M	P	P	G	D	W	A	A	G	E	R	G	M	A	A	I	S	G	R	E
Template Known Secondary structure									T	T	T	S		T	T	S												T	T		S					S			T	T	S												T	T											S		T	T	T	T			B		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	P	G	F	H	L	T	G	T	R	Q
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		Q	E	F	R	D	N	V	D	I	A	L	H	Y	A	L	A	L	D	C	R	T	L	H	A	M	S	G	I	T	E	G	L	.	D	R	K	A	C	E	E	T	F	I	E	N	F	R	Y	A	A	D	K	L	A	P	H	G	I	T	V	L	V	E	P	L	N	T	R	N	M	P	G	Y	F	I	V	H	Q	L	E
Template Known Secondary structure																		T	T								B		B		T	T	S	.																					G	G	G	T										T	T	T	S	T	T	B	S
Template Predicted Secondary structure																																		.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	E	L	T	N	T	M	T	Q	W	A	D	K	I	G	H	L	Q	I	A	D	N	P	H	R	G	E	P	G	T	G	E	I	N	Y	D	Y	L	F	K	V	I	E	N	S	D	Y	N	G	W	V	G	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	G	L	V	K	R	V	N	R	P	N	V	A	V	Q	L	D	L	Y	H	A	Q	I	M	D	G	D	L	T	R	L	I	E	K	M	N	G	A	F	S	H	V	Q	I	A	S	V	P	D	R	H	E	P	D	E	G	E	L	N	Y	P	Y	L	F	S	V	L	E	S	V	G	Y	R	G	W	V	G	C	E
Template Known Secondary structure												T	T														T										T	T	T	S									T	T	T				T	T	S	S	S													T	T			S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	P	Q	T	T	T	E	A	G	L	R	W	M	D	P	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	P	R	G	K	T	E	S	G	L	A	W	F	A	P	Y	R
Template Known Secondary structure					S	S	S	G	G	G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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