Job Description P30147 Confidence 42.47% Date Thu Jan 5 11:46:08 GMT 2012 Rank 206 Aligned Residues 130 % Identity 12% Template c3mo4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-1,3/4-fucosidase; PDBTitle: the crystal structure of an alpha-(1-3,4)-fucosidase from2 bifidobacterium longum subsp. infantis atcc 15697 Resolution 1.90 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	.	.	.	.	.	.	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	.	.	.	.	.	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	P	G	F	H	L	T
Query Conservation																				.	.	.	.	.	.																			.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		D	Q	W	X	D	A	L	V	A	G	G	X	A	G	V	I	L	T	C	K	H	H	D	G	F	C	L	W	P	S	R	L	T	R	H	T	V	A	S	S	P	W	R	E	G	K	G	D	L	V	R	E	V	S	E	S	A	R	R	H	G	L	K	F	G	V	Y	L	S	P	W	D	R	T	E	E	S	Y	G	K
Template Known Secondary structure											T	T		S									T	T			B	S	S			T	T		S	S	B	G	G	G	S	S	G	G	G	G	T														T	T									S			S	S		T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	E	L	T	N	T	M	T	Q	W	A	D	K	I	G	H	L	Q	I	A	D	N	P	H	R	G	E	P	G	T	G	E	I	N	Y	D	Y	L	F	K	V	I	E	N	S	D	Y	N	G	W
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	A	Y	D	D	F	Y	V	G	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	L	L	T	Q	Y	G	P	I	F	S	V	W	L	D	G	A	N	G	E	G	K	N	G	K	T	Q	Y	Y	D	W	D	R	Y	Y	N	V	I	R	S	L	Q	P	D	A	V
Template Known Secondary structure		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S			S										B		T	T	S		B																	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.																						.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		237	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		204	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions