Job Description P30147 Confidence 100.00% Date Thu Jan 5 11:46:08 GMT 2012 Rank 20 Aligned Residues 218 % Identity 14% Template c3lmzA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative sugar isomerase; PDBTitle: crystal structure of putative sugar isomerase. (yp_001305105.1) from2 parabacteroides distasonis atcc 8503 at 1.44 a resolution Resolution 1.44 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		L	R	F	S	A	N	L	S	M	L	F	G	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	G	F	R	G	V	E	F	M	F	P	Y	D	Y	.	.	.	.	.	.	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R	G	I	A	C
Query Conservation																																									.	.	.	.	.	.
Alig confidence								.																																	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	H	L	G	X	A	.	G	Y	T	F	V	N	F	D	L	D	T	T	L	K	T	L	E	R	L	D	I	H	Y	L	C	I	K	D	F	H	L	P	L	N	S	T	D	E	Q	I	R	A	F	H	D	K	C	A	A	H	K	V	T	G	Y	A	V	G	P	I	Y	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S						.	G	G	G	G	T	T	S												T	T								T	T	T	S		T	T																T	T											.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	P	G	F	H	L
Query Conservation
Alig confidence		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		.	.	.	.	.	X	K	S	E	E	E	I	D	R	A	F	D	Y	A	K	R	V	G	V	K	L	I	V	G	V	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	L	L	P	Y	V	D	K	K	V	K	E	Y	D	F	H	Y	A	I	H	L	H	G	P	D	I	.	.	.	.	K	T
Template Known Secondary structure		.	.	.	.	.			S															T		S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G												T										T	T		.	.	.	.	S	S
Template Predicted Secondary structure		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.
Query Sequence		T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	E	L	T	N	T	M	T	Q	W	A	D	K	I	G	H	L	Q	I	A	D	N	P	H	.	.	.	.	.	.	R	G	E	P	G	T	G	E	I	N	Y	D	Y	L	F	K	V	I	E
Query Conservation																																																									.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	D	A	T	D	V	W	V	H	T	K	D	L	D	P	R	I	G	X	C	L	D	V	G	H	D	L	R	N	G	C	D	P	V	A	D	L	K	K	Y	H	T	R	V	F	D	X	H	I	K	D	V	T	D	S	S	K	A	G	V	G	I	E	I	G	R	G	K	I	D	F	P	A	L	I	R	X	X	R
Template Known Secondary structure		S		S									T	T	S		T	T													T	T											G	G	G										S		S	S	T	T						T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		N	S	D	Y	N	G	W	V	G	C	E	Y	K	P	Q	.	.	.	.	.	T	T	T	E	A	G	L	R	W	M	D	P
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		E	V	N	Y	T	G	X	C	S	L	E	Y	E	K	D	X	K	D	P	F	L	G	I	A	E	S	I	G	Y	F	K	A
Template Known Secondary structure			T	T			S								S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions