Job Description P30147 Confidence 100.00% Date Thu Jan 5 11:46:08 GMT 2012 Rank 9 Aligned Residues 252 % Identity 15% Template c3ktcB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:xylose isomerase; PDBTitle: crystal structure of putative sugar isomerase (yp_050048.1) from2 erwinia carotovora atroseptica scri1043 at 1.54 a resolution Resolution 1.54 Å

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		3	.	.	.	.	.	.	10	.	.	.														.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.																									.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.																									.
Query Sequence		R	F	S	A	N	L	S	M	L	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	.	G	F	R	G	V	E	F	M	F	P	Y	.	.	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	.	A	G	D
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.																									.
Alig confidence							.						.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.																									.
Template Conservation							.
Template Sequence		E	F	G	A	G	.	L	W	H	F	A	N	Y	I	D	R	Y	A	V	D	G	Y	G	P	A	L	S	T	I	D	Q	I	N	A	A	K	E	V	G	E	L	S	Y	V	D	L	P	Y	P	F	T	P	G	V	T	L	S	E	V	K	D	A	L	K	D	A	G	L	K	A	I	G	I	T	P	E	I	Y	L	Q
Template Known Secondary structure							.	G	G	G	G	S					S	S		T	T		S	S																S	S									S		S	T	T														T										T	T	S	G
Template Predicted Secondary structure							.
Template SS confidence
		8	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		W	A	A	G	E	R	G	I	A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	.	.	.	.	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L
Query Conservation																																														.	.	.	.
Alig confidence																																														.	.	.	.
Template Conservation
Template Sequence		K	W	S	R	G	A	F	T	N	P	D	P	A	A	R	A	A	A	F	E	L	X	H	E	S	A	G	I	V	R	E	L	G	A	N	Y	V	K	V	W	P	G	Q	D	G	W	D	Y	P	F	Q	V	S	H	K	N	L	W	K	L	A	V	D	G	X	R	D	L	A	G	A	N	P	D	V	K	F	A	I	E
Template Known Secondary structure		G	G	T	T		S	T	T		S	S																						T		S							T	T				S	S	T	T	S	S																			T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.
Predicted Secondary structure																																																											.	.														.	.	.	.
Query SS confidence																																																											.	.														.	.	.	.
Query Sequence		I	E	P	I	N	H	F	D	I	P	G	F	H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	E	L	T	N	T	M	T	Q	W	A	D	.	.	K	I	G	H	L	Q	I	A	D	N	P	H	R	.	.	.	.	G	E	P	G
Query Conservation																																																											.	.														.	.	.	.
Alig confidence										.	.																																																.	.														.	.	.	.
Template Conservation										.	.
Template Sequence		Y	K	P	R	E	P	R	V	.	.	K	X	T	W	D	S	A	A	R	T	L	L	G	I	E	D	I	G	L	D	N	V	G	V	L	L	D	F	G	H	A	L	Y	G	G	E	S	P	A	D	S	A	Q	L	I	I	D	R	G	R	L	F	G	X	D	V	N	D	N	L	R	G	W	D	D	D	L	V	V	G
Template Known Secondary structure				S		S	S	S	S	.	.			S	S		S												T		T	T													T	T													T	T							B		B			S	S	S				B		T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		167	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		216	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure					.																												.
Query SS confidence					.																												.
Query Sequence		T	G	E	.	I	N	Y	D	Y	L	F	K	V	I	E	N	S	D	Y	N	G	W	V	G	C	E	Y	K	P	Q	T	.	T	T	E	A	G	L	R	W	M	D	P	Y
Query Conservation					.																												.
Alig confidence					.																												.
Template Conservation
Template Sequence		T	V	H	X	T	E	I	F	E	F	F	Y	V	L	K	I	N	N	W	Q	G	V	W	Q	L	D	Q	F	P	F	R	E	N	H	V	E	A	A	Q	L	S	I	R	F
Template Known Secondary structure		S	S															T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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