Job Description P30147 Confidence 60.95% Date Thu Jan 5 11:46:08 GMT 2012 Rank 158 Aligned Residues 132 % Identity 14% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.																												.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																											.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																											.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		F	L	A	R	F	E	K	A	A	Q	C	G	F	R	G	V	E	F	M	F	P	Y	D	Y	D	.	I	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	H	V	L	A	S	N	K	L	E	.	H	T	L	H	N	L	P	A	G	D	W	A
Query Conservation																											.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence																											.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation
Template Sequence		H	R	N	A	V	R	R	S	I	E	A	G	Y	D	I	V	Y	V	Y	G	A	H	G	Y	S	G	V	H	H	F	L	S	K	R	Y	N	Q	R	T	D	E	Y	G	G	S	L	E	N	R	M	R	L	L	R	E	L	L	E	D	T	L	D	E	C	A	G	R	A	A	V	A	C	R	I	T	V	E	E	E	I
Template Known Secondary structure													T		S								T	T		S								T	T	T					S	T	T	S	S	S					T															S	S	S	S								S				S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		A	G	E	R	G	I	A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	.	.	.	.	.	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I
Query Conservation																																											.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.														.												.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.														.																																									.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	G	I	T	.	.	.	.	.	.	.	.	.	.	.	R	E	D	I	E	G	V	L	R	E	L	G	E	.	L	P	D	L	W	D	F	A	M	G	S	W	E	G	D	S	V	T	S	R	F	A	P	E	G	R	Q	E	E	F	V	A	G	L	K	K	L	T	T	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S			.	.	.	.	.	.	.	.	.	.	.												T	T	.	S	S	S							S	S					S			T	T	T			T	T	T	T					T	T	T	G	G	G		S	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.														.																																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.												.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	I	N	H	F	D	I	P	G	F	H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	P	V	V	G	V	G	R	F	T	S	P	D	A	M	V	R	Q	I	K	A	G	I	L	D	L	I	G	A
Template Known Secondary structure		.	.	.	.	.						S														T	T	S		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions