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Job DescriptionP30147
Confidence97.33%DateThu Jan 5 11:46:08 GMT 2012
Rank45Aligned Residues191
% Identity12%Templatec3ivuB_
PDB info PDB header:transferaseChain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ARFEKAAQCGFRGVEFMFP. . YDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARA
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Template Sequence  QIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKILTHIRC. . . . . . . . . . . . . . . . . . . . . . . HMDDARVAVE
Template Known Secondary structure  T
S

GGG
TS

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Query Sequence  LGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQ
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Template Sequence  TGVDGVDVVIGTSQYLRKYSHDMTYIIDSATEVINFVKSKGIEVRF. . . SSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA
Template Known Secondary structure  TT
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GGG




TT
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Query Sequence  YDIYHMQRME. GELTNTMTQWADKIGHLQIADNPH. . . . . . . . . . . . . . . . . . . . . . RGEPGTGEINYDYLFKVIENSDY
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Template Sequence  DTVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGERNGITPLGALLARMYVTDR
Template Known Secondary structure  SSS



SSB
TTS
T

BGGG
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B
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   196...200.........210.........220.........230.........240.........250.........260.........270.....
 
   234.
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Query Sequence  NG
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Template Sequence  EY
Template Known Secondary structure 
Template Predicted Secondary structure 

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   276.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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