Job Description P30147 Confidence 87.67% Date Thu Jan 5 11:46:08 GMT 2012 Rank 88 Aligned Residues 212 % Identity 13% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																	.	.	.										.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.										.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	S	M	L	F	G	E	Y	D	F	L	A	R	F	.	.	.	E	K	A	A	Q	C	G	F	R	.	.	G	V	E	F	M	F	P	.	.	.	.	.	.	.	.	.	.	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R
Query Conservation																	.	.	.										.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.										.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Q	S	L	L	A	T	R	V	R	T	K	D	M	I	N	I	A	S	K	T	A	D	V	F	K	D	G	F	S	L	E	M	W	G	G	A	T	F	D	V	A	Y	N	F	L	K	E	N	P	W	E	R	L	E	R	L	R	K	A	I	P	N	V	L	F	Q	M	L	L	R	A	S	N	A	V	G	Y	K	N
Template Known Secondary structure						S	T	T										T								T	T	T	S	S							T	T								T	S																	S	S							B	G	G	G	B	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.																									.
Template Conservation					.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.																									.
Template Sequence		Y	P	D	.	.	.	.	.	.	.	.	.	.	N	V	I	H	K	F	V	Q	E	S	A	K	A	G	I	D	V	F	R	I	.	.	.	.	.	F	D	S	L	N	W	V	D	Q	M	K	V	A	N	E	A	V	Q	E	A	G	K	I	S	.	E	G	T	I	C	Y	T	G	D	I	L	N	P	E	R	S	N
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.														T							.	.	.	.	.			T	T			G	G	G	G										T	T				.								S		T	T		T	T	T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.																									.
Template SS confidence
		654	.	.											.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.						.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700		.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	F	H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	.	G	E	L	T	N	T	M	T	Q	W	A	D	K	I	G	H	L	Q	I	A	D	N	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	T	L	E	Y	Y	V	K	L	A	K	E	L	E	R	E	G	F	H	I	L	A	I	K	D	M	A	G	L	L	K	P	K	A	A	Y	E	L	I	G	E	L	K	S	A	V	D	L	P	I	H	L	H	T	H	D	T	S	G	N	G	L	L	T	Y	K	Q	A	I	D	A	G	V	D	I	I	D	T	A
Template Known Secondary structure		S	S															T	T		S							T	T	S																T	T			S									T	T	S												T	T							B
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions