Job Description P30147 Confidence 99.95% Date Thu Jan 5 11:46:08 GMT 2012 Rank 35 Aligned Residues 219 % Identity 16% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		21	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure									.										.	.	.	.	.	.	.	.
Query SS confidence									.										.	.	.	.	.	.	.	.
Query Sequence		F	E	K	A	A	Q	C	.	G	F	R	G	V	E	F	M	F	.	.	.	.	.	.	.	.	P	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R	G	I	A	C	I	P	G	R	E	E	E	F	R	D	G	V	A	A	A	I
Query Conservation									.										.	.	.	.	.	.	.	.
Alig confidence									.										.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		L	E	E	I	K	A	I	P	G	M	Q	G	I	V	T	A	V	Y	D	V	P	V	G	Q	A	W	P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	L	E	I	T	V	I	E	S	.	.	.	.	.	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I
Template Known Secondary structure							T	S	T	T										S	S		T	T	S																	T	T									.	.	.	.	.										T		T	T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																																							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L	P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A
Template Known Secondary structure								T										S	S		S				S	B	S	S				T	T	S		B						S	S	S	S		S	S												T
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.																																						.											.	.
Query SS confidence																			.	.	.																																						.											.	.
Query Sequence		M	K	E	D	I	L	L	L	I	E	P	I	N	H	F	D	I	.	.	.	P	G	F	H	L	T	G	T	R	Q	A	L	K	L	I	D	D	V	G	C	C	N	L	K	I	Q	Y	D	I	Y	H	M	Q	R	M	E	G	.	E	L	T	N	T	M	T	Q	W	A	.	.	D	K	I	G	H	L	Q	I	A	D
Query Conservation																			.	.	.																																						.											.	.
Alig confidence																			.	.	.																																						.											.	.
Template Conservation
Template Sequence		E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A	V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	S	D	P	K	N	D	V	L	A	M	T	E	Y	A	L	K	R	N	R	I	N	F	M	H	T	R	N
Template Known Secondary structure					T									S	S	S	S			T	T							S									T	T	S		S	T	T											T	T	S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		208	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		N	P	H	.	.	.	.	.	.	.	.	R	G	E	P	G	T	G	E	I	N	Y	D	Y	L	F	K	V	I	E	N	S	D	Y	N	G	W	V	G	C	E	Y	K	P	Q
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	A	G	A	W	G	F	Q	E	T	A	H	L	S	Q	A	G	D	I	D	M	N	A	V	V	K	L	L	V	D	Y	D	W	Q	G	S	L	R	P	D	H	G	R	R
Template Known Secondary structure						T	T							S	S	G	G	G	S	S													T	T												B
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions