Return to main results Retrieve Phyre Job Id

Job DescriptionP30147
Confidence100.00%DateThu Jan 5 11:46:08 GMT 2012
Rank24Aligned Residues246
% Identity14%Templatec2x7vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30....... ..40.........50.........60.........70
Predicted Secondary structure 












..........













Query SS confidence 




































. . . . . . . . . .
































Query Sequence  MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFP. . . . . . . . . . YDYDIEELKHVLASNKLEHTLHNLPAGDWAAGE
Query Conservation    
     
       
 
 
      
   


   ..........           
   

                
Alig confidence 











...





















..........




























...
Template Conservation    


       ... 
      
   
   


                            

 
     
    ... 
Template Sequence  MIKIGAHMPISK. . . GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYL. . . I
Template Known Secondary structure 





TT...
GGGTT
S
S


SSS





T

GGG

TT...
Template Predicted Secondary structure 





...


























...
Template SS confidence 















































































   1........10.. .......20.........30.........40.........50.........60.........70... .
 
   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  RGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDI
Query Conservation                      
  
  

   
                       
      
   

 
 

       
Alig confidence 









































.



































.
Template Conservation   
   
   
          
  
  

   

 
 
     .            
  
        
 

        .
Template Sequence  NLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGT. GEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGN.
Template Known Secondary structure 
TT
SST




TTS.
TT

S





TT.
Template Predicted Secondary structure 















.












.
Template SS confidence 















































































   75....80.........90.........100.........110...... ...120.........130.........140.........150..
 
   151........160......... 170.........180.........190 ....... ..200.........210
Predicted Secondary structure 






.

















......
.....





........
Query SS confidence 


















.




















. . . . . .






. . . . .












. . . . . . . .
Query Sequence  PGFHLTGTRQALKLIDDVG. CCNLKIQYDIYHMQRMEGELT. . . . . . NTMTQWA. . . . . DKIGHLQIADNPH. . . . . . . .
Query Conservation                     .        
  
         ......       .....  
  

  
   ........
Alig confidence  ...















.




















......






.....












........
Template Conservation  ...          
   
          
  
    
            
       
   
   

 
         
 
Template Sequence  . . . IGYKLEQLKKIRDLVDQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSKYPLGAAKDR
Template Known Secondary structure  ...
SS
S
GGGTT

TTST
GGG
SS
TT




Template Predicted Secondary structure  ...




































Template SS confidence 















































































   153......160.........170.........180.........190.........200.........210.........220.........
 
   211........220.........230..... ....240.... .....250.......
Predicted Secondary structure 














.

.....


Query SS confidence 
























.








. . . . .












Query Sequence  RGEPGTGEINYDYLFKVIENSDYNG. WVGCEYKPQ. . . . . TTTEAGLRWMDPY
Query Conservation     

 
 

   

  
   

 
.    
    .....      
  
   
Alig confidence 
























.








.....












Template Conservation 
   
 
 

       
      
   


                
 
 
 
Template Sequence  HERIGSGFIGEEGFAVFFSFKEIQEVPWILETPGGNEEHAEDIKKVFEIIEKF
Template Known Secondary structure 
TTSSSST
TS


SS
T
Template Predicted Secondary structure 






















Template SS confidence 




















































   230.........240.........250.........260.........270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions