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Job DescriptionP30147
Confidence44.00%DateThu Jan 5 11:46:08 GMT 2012
Rank201Aligned Residues136
% Identity13%Templatec2oylB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:endoglycoceramidase ii; PDBTitle: endo-glycoceramidase ii from rhodococcus sp.: cellobiose-like2 imidazole complex
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  MFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGF.
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Template Sequence  DGMPQFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYD. . . . . . QQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAI
Template Known Secondary structure  TS

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SBTTB

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GGG
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   70.........80.........90.........100......... 110.........120.........130.........140...
 
   114.....120.........130.........140...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SSEQIHATLVENLRYAANMLMKEDILLLIE
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Template Sequence  TPGAGAIGNGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYD
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SSSBSS
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SSGGGGGGSTTSSSS
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   144.....150.. .......160.........170......
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Query Sequence  PINHFDIPG. . . . . . . . . FHLTGTRQALKLIDDVGCCNLKIQ
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Template Sequence  LMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCV
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TT

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   230.........240.........250.........260.........270.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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