 |
Job Description | P30147 | Confidence | 36.56% | Date | Thu Jan 5 11:46:08 GMT 2012 |
Rank | 225 | Aligned Residues | 70 |
% Identity | 11% | Template | c2je8B_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:beta-mannosidase; |
PDBTitle: structure of a beta-mannosidase from bacteroides2 thetaiotaomicron
|
Resolution | 1.7 Å |
|
 |
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | A | R | F | E | K | A | A | Q | C | G | F | R | G | V | E | F | M | F | P | Y | D | Y | D | I | E | E | L | K | H | V | L | A | S | N | K | L | E | H | T | L | H | N | L | P | A | G | D | W | A | A | G | E | R | G | I | A | C | I | P | G | R | E | E | E | F | R | D | G | V | A | A | A | I | R |
Query Conservation |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|
| . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
Y | Q | T | L | F | R | D | M | K | E | A | N | M | N | M | V | R | I | W | G | G | G | T | Y | E | N | N | L | F | Y | D | L | A | D | E | N | G | I | L | V | . |
. |
. |
. |
. |
. |
W | Q | D | F | M | F | A | C | T | P | Y | P | S | D | P | T | F | L | K | R | V | E | A | E | A | V | Y | N | I | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  | T |
|  |  | . | . | . | . | . | . |  |  |  |
| S |
| B | S | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|