Job Description P30147 Confidence 27.95% Date Thu Jan 5 11:46:08 GMT 2012 Rank 262 Aligned Residues 122 % Identity 15% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		M	L	R	F	S	A	N	L	S	M	L	F	G	E	Y	D	F	L	A	R	F	E	K	A	A	Q	C	G	F	R	G	V	E	F	M	F	P	.	Y	D	Y	D	I	E	E	L	K	H	V	L	A	S	N	K	L	E	H	T	L	H	N	L	P	A	G	D	W	A	A	G	E	R	G	I	A	C	I	P	G	R
Query Conservation																																							.
Alig confidence																																							.															.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	R	F	A	V	L	G	H	P	V	A	H	S	L	S	P	A	M	H	A	F	A	L	E	S	L	G	L	E	G	S	Y	E	A	W	D	T	P	L	E	A	L	P	G	R	L	K	E	V	R	R	.	A	F	R	G	V	N	L	T	L	P	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S		T	T		S												T	T												G	G	G											.			S						T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	E	F	R	D	G	V	A	A	A	I	R	Y	A	R	A	L	G	N	K	K	I	N	C	L	V	G	K	T	P	A	G	F	S	S	E	Q	I	H	A	T	L	V	E	N	L	R	Y	A	A	N	M	L	M	K	E	D	I	L	L	L
Query Conservation
Alig confidence		.																																				.	.
Template Conservation		.																																				.	.
Template Sequence		.	E	A	A	L	A	H	L	D	W	V	S	P	E	A	Q	R	I	G	A	V	N	T	V	L	Q	V	E	G	R	L	F	G	F	N	T	.	.	D	A	P	G	F	L	E	A	L	K	A	G	G	I	P	L	K	G	P	A	L	V	L	G
Template Known Secondary structure		.	S	T	T	G	G	G	S	S										T									T	T								.	.												T	T					S
Template Predicted Secondary structure		.																																				.	.
Template SS confidence
			65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions