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Job DescriptionP30147
Confidence48.82%DateThu Jan 5 11:46:08 GMT 2012
Rank188Aligned Residues125
% Identity18%Templatec1vliA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ARFEKAAQCGFRGVEF. . . . . . . . . . . . . . . . . . . . . . . MFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIAC
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Template Sequence  ALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTVCDE. . . . . . . . . . . .
Template Known Secondary structure  T
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B
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Query Sequence  IPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHL
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Template Sequence  . . . . . . . . . . . . . GSADLLQSTSPSAFKIASYEINH. . . . . . . . . . . . . . . LPLLKYVARLNRPXIF. . . . . . STAGAEI
Template Known Secondary structure  .............TT

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   113......120.........130..... ....140.........150. .......
 
   156...160.........170..... ....180.........
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Query Sequence  TGTRQALKLIDDVGCCNLKI. . QYDIYHMQRMEGEL
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Template Sequence  SDVHEAWRTIRAEGNNQIAIXHCVAKYPAPPEYSNL
Template Known Secondary structure  TTT



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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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