 |
Job Description | P07013 | Confidence | 10.12% | Date | Thu Jan 5 10:59:59 GMT 2012 |
Rank | 90 | Aligned Residues | 45 |
% Identity | 22% | Template | d2pi2a1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Single strand DNA-binding domain, SSB
|
Resolution | 2.00 |
|
  |   |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | V | I | V | S | G | H | E | N | Q | A | I | T | H | S | I | T | V | G | S | R | I | T | V | Q | G | F | I | S | C | H | K | A | K | N | G | L | S | K | M | V | L | H | A | E | Q | I | E | L | I | D | S | G | D |
Query Conservation |   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   | . | . | . | . | . |   |   |
|   |   |
|   |
|
|
|
|   |
|   |
|
| . | . |   |
|   |   | . | . | . |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
M | D | V | R | Q | W | V | D | N | . |
. |
. |
. |
. |
T | V | V | P | P | E | T | Y | V | K | V | A | G | H | L | R | . |
. |
S | F | Q | N | . |
. |
. |
K | K | S | L | V | A | F | K | I | M | P | L | E | D | M | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  | . | . |  |  | T | T | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
| S |
| T |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
|
. | . | . | 130 | |
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|