Job Description P07013 Confidence 96.85% Date Thu Jan 5 10:59:59 GMT 2012 Rank 25 Aligned Residues 84 % Identity 17% Template c3stbC_ PDB info PDB header:rna binding protein/immune system Chain: C: PDB Molecule:rna-editing complex protein mp42; PDBTitle: a complex of two editosome proteins and two nanobodies Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		N	R	L	V	L	S	G	T	V	C	R	A	P	L	R	K	V	S	P	S	G	I	P	H	C	Q	F	V	L	E	H	R	S	V	Q	E	E	A	G	F	H	R	Q	A	W	C	Q	M	P	V	I	V	S	G	H	E	.	N	Q	A	I	T	H	S	I	T	V	G	S	R	I	T	V	Q	G	F	I	S	C	H
Query Conservation																																																										.
Alig confidence												.	.																														.	.														.
Template Conservation												.	.																														.	.
Template Sequence		N	H	C	V	M	L	G	V	V	Q	.	.	N	I	Q	E	G	F	V	F	E	D	K	V	L	Q	F	T	L	I	T	D	F	E	G	P	S	P	G	D	P	.	.	D	K	D	F	H	T	V	R	V	F	D	S	D	Y	S	S	R	V	K	E	Q	L	R	D	G	E	W	F	L	V	T	G	R	L	R	M	V
Template Known Secondary structure		S										.	.								T	T													S	S			T	T	S		.	.	S										S													T	T
Template Predicted Secondary structure												.	.																														.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		82	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	K	N	G	L	S	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	Y	D	G	S	M	R	K
Template Known Secondary structure						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions