Job Description P07013 Confidence 96.93% Date Thu Jan 5 10:59:59 GMT 2012 Rank 24 Aligned Residues 82 % Identity 17% Template c3k81D_ PDB info PDB header:immune system, rna binding protein Chain: D: PDB Molecule:mp18 rna editing complex protein; PDBTitle: structure of the central interaction protein from the trypanosoma2 brucei editosome in complex with single domain antibodies Resolution 3.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		N	R	L	V	L	S	G	T	V	C	R	A	P	L	R	K	V	S	P	S	G	I	P	H	C	Q	F	V	L	E	H	R	S	V	Q	E	E	A	G	F	H	R	Q	A	W	C	Q	M	P	V	I	V	S	G	H	E	N	.	Q	A	I	T	H	S	I	T	V	G	S	R	I	T	V	Q	G	F	I	S	C	H
Query Conservation																																																											.
Alig confidence																			.	.																									.	.	.												.
Template Conservation																			.	.																									.	.	.
Template Sequence		N	S	V	T	L	V	G	V	V	H	D	I	Q	S	G	F	V	.	.	Y	E	D	A	V	T	Q	F	T	L	T	T	T	S	I	D	T	E	V	V	V	E	K	D	.	.	.	H	H	T	I	R	C	F	G	E	L	F	S	A	E	V	K	Q	K	V	K	E	G	N	V	V	C	V	N	G	R	L	R	L	S
Template Known Secondary structure																			.	.	T	T																							.	.	.								S													T	T
Template Predicted Secondary structure																			.	.																									.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	K	N	G	L	S	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	Q	L	E	P	S	C	N
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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