Return to main results Retrieve Phyre Job Id

Job DescriptionP07013
Confidence16.58%DateThu Jan 5 10:59:59 GMT 2012
Rank69Aligned Residues79
% Identity16%Templatec2vl6C_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:minichromosome maintenance protein mcm; PDBTitle: structural analysis of the sulfolobus solfataricus mcm2 protein n-terminal domain
Resolution2.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80........ .90
Predicted Secondary structure 





















......
Query SS confidence 







































































. . . . . .

Query Sequence  RKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLS. . . . . . KM
Query Conservation 

 
  
  
  
 

        
        
 

  
  

     
 

  
 
 
 
  
       ......
 
Alig confidence 










































....
























......

Template Conservation         
   
 
 
 


       
  



 
 
  


....
 
 


 
 
 


                  
Template Sequence  FRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLV. . . . DSARPGDRVKVTGILDIKQDSPVKRGSRAVFDI
Template Known Secondary structure 
GGG


GGGS
TTS


GGGT....TSS
TT

SSTT

SS



Template Predicted Secondary structure 


















....














Template SS confidence 















































































   180.........190.........200.........210.........220.. .......230.........240.........250.....
 
   91........
Predicted Secondary structure 
Query SS confidence 








Query Sequence  VLHAEQIEL
Query Conservation   
    

 
Alig confidence 








Template Conservation   
 
  


Template Sequence  YMKVSSIEV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   256...260....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions